Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1342 ATGCTCTTCTTTGATTTTATAGCAGTTTCTGTGGAAAAATTTTATTCTTTTTTCGATGAGTTTGGCTTACTGCATACTGTTCACTGTCAGTTTGGTTGTAAGATGGTGGATTCAATGAAGAAGGTCGCAAATCTTGATGTTGAACTCACTGTTGAGGAGCGGAATCTTCTCTCTGTTGGTTACAAGAATGTGATTGGAGCTCGCAGAGCATCTTGGAGGATCTTGTCTTCCATTGAGCAAAAGGAGGAAACTAAGGGGAATGAAGTAAATGCGAAGCGGATTAAGGAGTACAGGAACAAGGTTGAGGCAGAGCTTACAAACATCTGTAACGATGTTATGAGGGTGATTGATGAACACCTTATACCTTCGGCTACAGCTGGTGAATCAACTGTGTTCTATTATAAAATGAAAGGAGATTACTATCGTTATCTTGCTGAATTTAAGAGTGGCAATGAGAAGAAGGAGGCTGCTGATCAGTCAATGAAAGCATATGAGTCTGCTACCACTGCAGCAGAGGCTGAATTACCCCCTACACATCCCATTCGTTTGGGTCTTGCTTTGAATTTCTCAGTTTTCTATTATGAGATCTTAAATTCACCTGAGAGGGCCTGTCATCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCCGAGCTTGATACCTTGAATGAGGATTCATACAAAGATAGCACCTTGATCATGCAACTTCTCAGGGACAACCTTACCTTGTGGACTTCTGACATCCCAGAAGATGGAGAAGATGCCCAGAAAGTCAATGGCACTGCCAAGCTTGGTGGAGGTGAGGATGCTGAGTGA 813 0.4207 MLFFDFIAVSVEKFYSFFDEFGLLHTVHCQFGCKMVDSMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNEVNAKRIKEYRNKVEAELTNICNDVMRVIDEHLIPSATAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEDSYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKVNGTAKLGGGEDAE* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1342 270 PANTHER 14-3-3 PROTEIN 34 256 IPR000308 -
Amo08g1342 270 PIRSF 14-3-3 18 256 IPR000308 -
Amo08g1342 270 Pfam 14-3-3 protein 34 244 IPR023410 -
Amo08g1342 270 PRINTS 14-3-3 protein zeta signature 217 246 IPR000308 -
Amo08g1342 270 PRINTS 14-3-3 protein zeta signature 48 77 IPR000308 -
Amo08g1342 270 PRINTS 14-3-3 protein zeta signature 128 150 IPR000308 -
Amo08g1342 270 PRINTS 14-3-3 protein zeta signature 97 121 IPR000308 -
Amo08g1342 270 PRINTS 14-3-3 protein zeta signature 163 189 IPR000308 -
Amo08g1342 270 PRINTS 14-3-3 protein zeta signature 190 216 IPR000308 -
Amo08g1342 270 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 34 256 - -
Amo08g1342 270 SUPERFAMILY 14-3-3 protein 36 253 IPR036815 -
Amo08g1342 270 SMART 1433_4 19 257 IPR023410 -
Amo08g1342 270 ProSitePatterns 14-3-3 proteins signature 2. 226 245 IPR023409 -
Amo08g1342 270 MobiDBLite consensus disorder prediction 247 270 - -
Amo08g1342 270 ProSitePatterns 14-3-3 proteins signature 1. 54 64 IPR023409 -
Amo08g1342 270 Gene3D - 15 258 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1342 Amo-Chr8 21816380 21818847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1342 34 270 14-3-3 family AT2G42590 82.845 2.31e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1342 K06630 - gmx:547990 449.514