Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1318 AGGGAAAATGGGGATTGGCAATTTCATGCCTCAGCATCTGAGTATAAGCGACGTAAAGTTTCTGCCGTTCGTGATTTCCCTGAAGGATGTGGACCGTTTGCTCCAAGGATTGAAGCAGTTTTAAGAGGTATATATTGTGAGGACAATAGCCAGCATCCTGAGTTACATGCCAAAACTCTTGTCCAAACTACTGATTGCAGTTTGAATAAGGAAAATCCAGTCGTCTCATCTGATCAAGTGGATAGGCCTCCTCTGGTAAATGACGAACCTGCAAAAATGTTGCTGGCAGACATGGAAGCTTTGGCAGATACAGAATCTGGAAGAGCTGTGAAGTTGTCTTCTCCAGTTGGTGAGGTGGCTGGTTCCAGTGCTTGGACGGAGAATATGCTAACTAGAAGCTATTTTCCTCGAAGGAAAGTTTCAGCTATTAGAGACTTTCCTGCTTTATGTGGACGCAATGCTCCATCTTTGCTGAATGAAAATAGAGGGGTTGAACAGAAGGCGACTGTAAATGATGACCTCTTGAAAAAAGTAGCTGCCACTGAAATGAAGGAAGCTGAAAATAATGCTCAAGATGATTCTTGCAAGAGAAAGCTTGTGGACATAGTTTTAGCTGATTCTGAAGGGAATGCTACAGAGAATGTGAACAAGCAGGATGTATGTGAACCACCTATTGGGATAAATAAGCAACACAAAAACCCCAGAGAAATGAAAATTGAACTTCCTACAGAGATTGATCATCATCAGGCTGAAATAAATTCTAGGGAAGCAGAAAATGAGGATTCCGGGCTCTTGAGGCAAAGCCTTGTGCGGGCTGTATCAAACAGGAAAGTAGTGCTAGGGTTGAAGTCTGGGTCAGAATGTTTTCTGAGGTCTAATAATGGTCCCTCCAAATTTAAAGGGATTGATGCCTCTGAAGAAGAAAAAGGAAAATGCTGCTTCCATGACAGAGGTCAGTTAGAAATTTTGGACAAGGATTGTGTTGATCCTAATCAAAATGGTGCGGACTTTCAAACTGTCACAAAACCATGTAGTTTCAAATTCTTGAGTGATAATGAGAATGACTCAAATGTTACTCGACATAAAGTGCGGGAAACACTACGACTTTTTCAAGCTGTTTCTAGAAAGCTTTTGCAGGAACTAGAAGCAAAGAATGAGCGGGGAAGGGTTGACTTACTAGCAGCGAAGGTCCTTAAGGAGAAGGGGAAATATGTTAATGAAGGTAAGCAGATCTTGGGATCTGTACCTGGGATTGAAGTTGGTGATGAATTTCAGTATAGAATTGAGCTTAATATAGTTGGCCTTCATCGGCAAATTCAGGGCGGTATAGATTATGTGAAGCACAGTGGTGAAAGATTCTTGCACAGACAAGGTGGTAATGTGATGAACTCTGACAAACAACCTGAAGATCAAAAGCTTGAACGGGGAAATCTTGCTTTGAAGAATAGTAATGACGAACAGAACCCTGTTAGGGTGATACGTGGTGCTGATTCAGCAGATGGAAAGTCCAAGACGTATGTTTATGATGGACTGTACCTGGTTGAGTCATGTTGGCAGGATATGGGGCCACATGGGAAGCTGGTATATAAGTTTCGGTTGCGAAGAATCTCTGGTCAACCAGAGCTTCCTTTGAAGGAATTGAAGAAATCTAAGAAGTTCAAAATGAGAGAAGGTCTATGTGTTAATGATATTTCTTATGGGAAAGAGCGAATTCCAGTGTGTGCTGTGAATGTCAGAGATGATGAAAAACCCCCACCTTTTAAATACATAACCAGCATGATTTATCCTGATTGTGATCTCATTCCTGCAGAAGGATGTGGTTGCATTAATGGTTGTTCTGAGTTGGATGTTCTTGTAATCACAAATGGGGCTATTGTAGAAGCAAAGCCTCTAGTTTTTGAGTGTGGACCTTCTTGCAAGTGCCCCTTTGATGACAAAAAAGGGAAGAGAATAACAAATAAAAAAATAAAATTTCAACTTGAAATTTTCAAAACCAGTACAAGGGGATGGGGAGTGAGATCCCTAAATTCCATCCCTTCAGGTGTGTGGGATGATTCATACTACATCAGCTTTGTTCTCTGTCAAAAAATCGTGTATGCTCAAATAGTGCGTGTACTGAGACAATCATCCGACTATGTAAGGATGCCTCACATCATGTTCTTTGCTGCTGAGAACATTCCTCCTCTGCAAGAGCTGGCTTATGACTACAACTACATGATCGACCAGGTCCACGACTCCGATGGCAACATCAAACGGAAAGATTGCTACTGCGGTTCTGTGCAATGTACAGGTAGGATGTACTGA 2304 0.4171 RENGDWQFHASASEYKRRKVSAVRDFPEGCGPFAPRIEAVLRGIYCEDNSQHPELHAKTLVQTTDCSLNKENPVVSSDQVDRPPLVNDEPAKMLLADMEALADTESGRAVKLSSPVGEVAGSSAWTENMLTRSYFPRRKVSAIRDFPALCGRNAPSLLNENRGVEQKATVNDDLLKKVAATEMKEAENNAQDDSCKRKLVDIVLADSEGNATENVNKQDVCEPPIGINKQHKNPREMKIELPTEIDHHQAEINSREAENEDSGLLRQSLVRAVSNRKVVLGLKSGSECFLRSNNGPSKFKGIDASEEEKGKCCFHDRGQLEILDKDCVDPNQNGADFQTVTKPCSFKFLSDNENDSNVTRHKVRETLRLFQAVSRKLLQELEAKNERGRVDLLAAKVLKEKGKYVNEGKQILGSVPGIEVGDEFQYRIELNIVGLHRQIQGGIDYVKHSGERFLHRQGGNVMNSDKQPEDQKLERGNLALKNSNDEQNPVRVIRGADSADGKSKTYVYDGLYLVESCWQDMGPHGKLVYKFRLRRISGQPELPLKELKKSKKFKMREGLCVNDISYGKERIPVCAVNVRDDEKPPPFKYITSMIYPDCDLIPAEGCGCINGCSELDVLVITNGAIVEAKPLVFECGPSCKCPFDDKKGKRITNKKIKFQLEIFKTSTRGWGVRSLNSIPSGVWDDSYYISFVLCQKIVYAQIVRVLRQSSDYVRMPHIMFFAAENIPPLQELAYDYNYMIDQVHDSDGNIKRKDCYCGSVQCTGRMY* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1318 767 ProSiteProfiles YDG domain profile. 413 535 IPR003105 -
Amo08g1318 767 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 315 453 - -
Amo08g1318 767 Gene3D SET domain 693 767 IPR046341 -
Amo08g1318 767 Gene3D SET domain 556 683 IPR046341 -
Amo08g1318 767 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH5 694 766 - -
Amo08g1318 767 ProSiteProfiles Post-SET domain profile. 751 767 IPR003616 -
Amo08g1318 767 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH5 457 682 - -
Amo08g1318 767 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH5 315 453 - -
Amo08g1318 767 Pfam SAD/SRA domain 412 539 IPR003105 -
Amo08g1318 767 SMART G9a_1 408 539 IPR003105 -
Amo08g1318 767 Pfam Pre-SET motif 564 642 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Amo08g1318 767 SUPERFAMILY PUA domain-like 395 548 IPR015947 -
Amo08g1318 767 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 457 682 - -
Amo08g1318 767 SMART preset_2 561 640 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Amo08g1318 767 SMART PostSET_3 751 767 IPR003616 -
Amo08g1318 767 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 694 766 - -
Amo08g1318 767 SUPERFAMILY SET domain 551 738 IPR046341 -
Amo08g1318 767 Gene3D - 394 451 IPR036987 -
Amo08g1318 767 Gene3D - 452 555 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1318 Amo-Chr8 21486163 21489070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1318 349 681 Su(var)3-9 homologs AT5G04940 35.696 7.44e-53 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1318 K11420 - gmx:100803378 619.387