Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1310 ATGTTGCTTCTTGCTTGCATAGATACATGGCTGGCTTCTCATTCCACGTGTCCAATTTGTAGAACCAAGGCTGAACCAATCATAGGCCTTCAACTTCAACCTCACCCTCCTGAGCCTCCTATTCTTCTTCATGATGATGCTTCAACTTTTGAAGCTACTTCTGATAATAACAACAATTCTGCTATTGTGGGTAAGAACATTACTGGTTCTTCTGTTTCAAGATTCAGCAGCTCTTTTAGAAGGATTCTAAGTAGGGATAGATCTTCTAGCACAAGAATTCAACCTTCCATAGTTACCCATCTTGATGATCATGATTTAGAGAGCCAGCAATAA 333 0.3994 MLLLACIDTWLASHSTCPICRTKAEPIIGLQLQPHPPEPPILLHDDASTFEATSDNNNNSAIVGKNITGSSVSRFSSSFRRILSRDRSSSTRIQPSIVTHLDDHDLESQQ* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1310 110 SUPERFAMILY RING/U-box 5 31 - -
Amo08g1310 110 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 29 IPR013083 -
Amo08g1310 110 PANTHER RING FINGER DOMAIN-CONTAINING 4 108 - -
Amo08g1310 110 MobiDBLite consensus disorder prediction 85 110 - -
Amo08g1310 110 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 4 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1310 Amo-Chr8 21302903 21303235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1310 4 92 C3H Transcription Factor Family AT2G42350 46.067 6.00e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1310 K19038 - gmx:100796057 74.7146