Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1291 ATGCCTCTCTATTCTTTTCTTCTTCTTCTTTGTTACTCCCCTCTCTCACTCAACCAAGAAGGCCTGCTCCTTCTAGAAGCCAAGAACCAACTACTTCCATCATCCTCCTCCTCCCTCGCCGACTGGAACCCCCGCGACCCCACCCCATGCAACTGGACCTGCGTCACATGCAACCCCAATACCTCCCACGTCATCTCCCTCTCCCTCTCCTCTCTCTCCCTCTCCGGCCCTATTCCCTCGTCCCTCTGCCGCCTACCCTCCCTCTCTACTCTCTATCTCGACGACAACTTCCTCATCTCCCCCCTACCCTCCACTCTTTCCCTCTGCACCTCCCTCACCCACCTTAACCTCTCTGGAAACCTCTTCACCGGACCCATCCCTTCTTTTCTCTCCTCTCTCCCCTCCCTTCTCCACCTCGACCTCTCCTTCAACAACTTTTCCGCTTCTATTCCCCCTTCCTTCTCTCTCTTCCCCAACCTCCGATCCCTCAACCTCGTCGAAAACCTCCTCAACGGAACCATCCCTTCGTTTCTCACCAACCTCACCACCTTAACCTTCCTCCACTTGTCCTACAACCCTTTTCTTCCTGCTCCGTTACCGAGTGAGTTCGGCAACATGACCAACCTCCAGGACTTGTCTCTTTCCGGCTGCAACCTCCTCGGTCCAATTCCCGCTTCATTGGGGAAGCTATCCAACCTTCGAAACCTTGAACTAACCTATAACAGCCTCCAGGGTGCCATACCGGAGTCTCTCATCTCCGGCCTCACCAGCATCGTGTTTCTCGAGCTCTATGAAAACTCGCTCTCTGGTTCATTGCCACGTGGCGCTGTGTGGAACAACCTCACCCATTTGGAAGGCTTCGACGCCTCCGGGAACGACTTGACAGGGACGATTCCCTCCGAGTTGACTCGGTTGAAGAAACTCGGTTCTCTCAACTTGTTCAATAACAACCTCGAAGGCTCTCTGCCGGAGAGTATCGTCGAGGCCGAGAGCTTGTACGAGCTTAAACTGTTCAACAACTCGCTCAATGGGTCGTTGCCGAGTCAACTCGGGAGCAACTCGCCCCTGCAGACACTCGACCTCTCGTACAACAACTTCTCCGGCGAGATTCCGGCGGGATTGTGCCGCCGGGGAGCGATGCAGGAGATCATGCTAATTTACAACTCGTTCTCCGGCAGAATCCCCGAGAGTCTGGGGGATTGCAGGAGCTTGATGAGGGTTCGAATAAGGAACAATAACATTTCGGGAACTGTTCCCGATGCTATGTGGGGACTGCCACACCTTTTTCTTCTGGAGCTTGATGATAATTCCCTTACTGGGTCGATTTCTACTTCTATTTCTGGCGCAAGCAACATGTCAAGTTTGTCGCTTTCCTTCAACATGTTCTCAGGGTCTGTTCCCCAGGAAATTGGGAATTTGGACAACCTTGTTCAGTTTGTCGCCAGCCATAATAGGCTATCTGGTCGGATTCCGACGAGTGTTGTGAAATTGAGTCAGTTGGGGAAGCTTGTGATTAGTGATAATGAGCTTTCGGGTGAGATACCTTTGGGGATTAGTGCTTTGGAAAAGCTTAATGATCTTGATTTGTCCAATAATAAGCTTGATGGTAACATTCCAAGTGAATTAGGAACCTTGCCGGTGCTTAATTATCTTGATCTTTCAGGGAATCTTTTCTCCGGTAGGATCCCAATTGAGCTGCAGAATTTGAATCTTAATTTGCTGAATTTGTCGAATAATCAGCTTTCAGGGGAGATCCCTAAAGAATTCGACAATGAGAATTACAAGAAGAGTTTTCTTGGAAATCCAGGGCTGTGTAGTTCTTCTTCAGTCTCTGGGCTCTGTCAAAATTTAGGTGAGAAGAAGAAGAACAAGATAAAGTATGATTGGGTTTTCAGGTTCATATTTGTGCTTGCTGGAATTGTGTTTGTTGTTGGGGTAACATGGTTTTGGTTCAAATTTAGGAGCATTAAGAAGATGAAGAAGAAAGTGATGCCTAACATGTTAAAATGGAGATCTTTTCACAAACTTGGATTCAGTGAGTATGAGGTTGTGAAGTTGCTGAGTGAAGACAATGTCATAGGTAGTGGAGCATCCGGGAAAGTTTACAAGGTTGTCCTGAGCAATGGTGAAGCTGTGGCAGTGAAGAAATTATGGGGACCAAAAAACAGGACTACTGTTTCTGAAAAAGATGGTTTTTTTGAAGCTGAGGTGGAAACATTGGGAAAAATCAGGCACAAGAATATTGTGAGGCTATGGTGTTGTTGTAACAGTGGTGATAGCAAGCTCTTAGTTTATGAGTACATGCCTAATGGAAGCCTTGCTGATTTGCTTCACAGTAGCAAGAGAAGCTTGTTGGATTGGCCAATTAGGTACAGAATTGCCATTGATGCTGCTGAGGGGCTTTCTTATTTGCATCACTATTGTGTTCCTCCTATTGTTCATAGGGATGTCAAATCCCACAATATATTGCTTGATGAAGACTTTGGAGCAAAAGTTGCAGATTTTGGTGTGGCCAGAACTTTTAGCAGGGTTACCCAAGGTGCAGAATCTATGTCTGCAATTGCCGGATCTTATGGTTACATAGCACCAGAATATGCTTACACTCTAAGAGTGAATGAGAAGAGTGACATCTATAGTTTTGGAGTGGTAATTTTAGAATTGGTAAGTGGGAGAGCTCCACTTGATCCAGCATATGGTGACAAAGATTTGGTGAAATGGGTTTCTTCCACATTGGAGCAGAGTGGAGAGGATCAAGTGATTGATCCAACTATGGATGTTAAGTACAAGGGAGAAATCATTAAGGTACTAAACATAGGGCTCCTTTGCACAAACCCTCTTCCCATAAACCGGCCTTCAATGCGCAAGGTGGTGACAATGCTGCATGAAATATCTGCAATTCCCAGAACAACAAGTGGAAAATTGTCCCCTTATTATCAAGAAGAGGCCTCTGATAATGAAAATCATCATGGAAACACGGTTTGA 2982 0.4671 MPLYSFLLLLCYSPLSLNQEGLLLLEAKNQLLPSSSSSLADWNPRDPTPCNWTCVTCNPNTSHVISLSLSSLSLSGPIPSSLCRLPSLSTLYLDDNFLISPLPSTLSLCTSLTHLNLSGNLFTGPIPSFLSSLPSLLHLDLSFNNFSASIPPSFSLFPNLRSLNLVENLLNGTIPSFLTNLTTLTFLHLSYNPFLPAPLPSEFGNMTNLQDLSLSGCNLLGPIPASLGKLSNLRNLELTYNSLQGAIPESLISGLTSIVFLELYENSLSGSLPRGAVWNNLTHLEGFDASGNDLTGTIPSELTRLKKLGSLNLFNNNLEGSLPESIVEAESLYELKLFNNSLNGSLPSQLGSNSPLQTLDLSYNNFSGEIPAGLCRRGAMQEIMLIYNSFSGRIPESLGDCRSLMRVRIRNNNISGTVPDAMWGLPHLFLLELDDNSLTGSISTSISGASNMSSLSLSFNMFSGSVPQEIGNLDNLVQFVASHNRLSGRIPTSVVKLSQLGKLVISDNELSGEIPLGISALEKLNDLDLSNNKLDGNIPSELGTLPVLNYLDLSGNLFSGRIPIELQNLNLNLLNLSNNQLSGEIPKEFDNENYKKSFLGNPGLCSSSSVSGLCQNLGEKKKNKIKYDWVFRFIFVLAGIVFVVGVTWFWFKFRSIKKMKKKVMPNMLKWRSFHKLGFSEYEVVKLLSEDNVIGSGASGKVYKVVLSNGEAVAVKKLWGPKNRTTVSEKDGFFEAEVETLGKIRHKNIVRLWCCCNSGDSKLLVYEYMPNGSLADLLHSSKRSLLDWPIRYRIAIDAAEGLSYLHHYCVPPIVHRDVKSHNILLDEDFGAKVADFGVARTFSRVTQGAESMSAIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVSGRAPLDPAYGDKDLVKWVSSTLEQSGEDQVIDPTMDVKYKGEIIKVLNIGLLCTNPLPINRPSMRKVVTMLHEISAIPRTTSGKLSPYYQEEASDNENHHGNTV* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1291 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Amo08g1291 993 SUPERFAMILY L domain-like 32 372 - -
Amo08g1291 993 SMART serkin_6 687 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1291 993 Pfam Protein kinase domain 689 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1291 993 SUPERFAMILY RNI-like 278 588 - -
Amo08g1291 993 Gene3D Transferase(Phosphotransferase) domain 1 768 974 - -
Amo08g1291 993 Gene3D Ribonuclease Inhibitor 17 173 IPR032675 -
Amo08g1291 993 Gene3D Ribonuclease Inhibitor 379 491 IPR032675 -
Amo08g1291 993 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 973 - -
Amo08g1291 993 Gene3D Phosphorylase Kinase; domain 1 655 767 - -
Amo08g1291 993 SMART LRR_typ_2 230 254 IPR003591 -
Amo08g1291 993 SMART LRR_typ_2 305 329 IPR003591 -
Amo08g1291 993 SMART LRR_typ_2 521 545 IPR003591 -
Amo08g1291 993 SMART LRR_typ_2 133 156 IPR003591 -
Amo08g1291 993 SMART LRR_typ_2 85 109 IPR003591 -
Amo08g1291 993 SMART LRR_typ_2 181 205 IPR003591 -
Amo08g1291 993 SMART LRR_typ_2 350 377 IPR003591 -
Amo08g1291 993 SMART LRR_typ_2 255 279 IPR003591 -
Amo08g1291 993 Pfam Leucine rich repeat 111 170 IPR001611 GO:0005515
Amo08g1291 993 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 6 973 - -
Amo08g1291 993 Gene3D Ribonuclease Inhibitor 492 614 IPR032675 -
Amo08g1291 993 Gene3D Ribonuclease Inhibitor 277 378 IPR032675 -
Amo08g1291 993 Gene3D Ribonuclease Inhibitor 174 276 IPR032675 -
Amo08g1291 993 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Amo08g1291 993 ProSiteProfiles Protein kinase domain profile. 687 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1291 993 PRINTS Leucine-rich repeat signature 356 369 - -
Amo08g1291 993 PRINTS Leucine-rich repeat signature 521 534 - -
Amo08g1291 993 Pfam Leucine rich repeat N-terminal domain 18 58 IPR013210 -
Amo08g1291 993 SUPERFAMILY Protein kinase-like (PK-like) 683 961 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1291 Amo-Chr8 21054825 21058505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1291 15 985 Receptor kinase-like Gene Family AT1G28440 56.307 0.0 1065
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo08g1291 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1291 - - aip:107613214 1718.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0988 18 15997488 16001294 Amo08g1291 08 21054825 21058505 hybridization