Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1275 ATGAAGCGTTATGTTTATATAAATGATGATGAATCAGCTCATGATTTATACTGTGATAATCGTATATCAAACAGAAAGTATACTGTGCTGAACTTTATTCCGAAAAATTTATGGGAACAGTTCAGCCGGTTCATGAATCAGTACTTTTTGCTGATAGCTTGCCTACAGCTATGGTCTCTCATCACTCCAGTAAATCCTGCCAGTACATGGGGTCCACTTATCTTCATTTTTGCAGTCTCTGCAACAAAAGAGGCATGGGATGATTACCATAGATACCTGTCAGACAAGAAGGCAAATGAGAAAGAAGTCTGGGTTGTCAGAAATGGCATCAAGAAACTTATCCAAGCCCAGGATATTCATGTAGGTAATATAGTATGGCTACGTGAAAATGATGAAGTGCCTTGTGACCTTGTTTTGATTGGCTCCTCTGATCCACAAGGACTTTGCTATATAGAGACTGCTGCAATGGATGGTGAAACTGATCTGAAGACAAGAGTCATACCTTCTGCCTGCATGGGAATTGATGTTGAACTATTGCACAAAATTAAGGGTGTAATCGAGTGTCCCACTCCAAATAAAGACATCAGAAGGTTTGATGCCAACATGCGGTTGTTCCCCCCATTTATTGATAATGATATATGCCCTTTAACCATTAAAAACACAGTTCTCCAGTCATGTTACTTACGGAACACTGAGTGGGCATGTGGAGTAGCTGTGTACACAGGCAACGAAACCAAATTGGGCATGAGTAGAGGTATACCAGAACCAAAGCTCACTGCTATGGATGCCATGATAGACAAGTTGACTGGTGCTATATTTGTATTCCAAATTGTTGTTGTAATGGTTCTTGGCATAGCGGGTAATGTGTGGAAGGACACAGAAGCAAAGAAACAATGGTATGTTCTTTACCCTGATAAAGGCCCTTGGTATGAACTATTGATCATCCCTCTGCGGTTCGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTATCTCTAGATCTGTGA 1014 0.4053 MKRYVYINDDESAHDLYCDNRISNRKYTVLNFIPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYHRYLSDKKANEKEVWVVRNGIKKLIQAQDIHVGNIVWLRENDEVPCDLVLIGSSDPQGLCYIETAAMDGETDLKTRVIPSACMGIDVELLHKIKGVIECPTPNKDIRRFDANMRLFPPFIDNDICPLTIKNTVLQSCYLRNTEWACGVAVYTGNETKLGMSRGIPEPKLTAMDAMIDKLTGAIFVFQIVVVMVLGIAGNVWKDTEAKKQWYVLYPDKGPWYELLIIPLRFELLCSIMIPISIKVSLDL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1275 337 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 330 - -
Amo08g1275 337 Pfam E1-E2 ATPase 99 291 - -
Amo08g1275 337 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Amo08g1275 337 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 332 IPR023298 -
Amo08g1275 337 Gene3D - 74 251 - -
Amo08g1275 337 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Amo08g1275 337 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1275 Amo-Chr8 20826038 20828901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1275 1 337 Primary Pumps ATPases AT5G44240 88.724 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1275 K01530 - tcc:18608746 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0975 18 15765510 15775759 Amo08g1275 08 20826038 20828901 hybridization