Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1260 ATGGCAATTCATTCATCAATTAAGGGGCTTGTAGGGCTTTTTGTTGTTGTTATTGTGGTGAGTTCATCATCATTTGAAGCATCAGCAACTACATTCAACGTTGGTGGCAAGAGTGGCTGGGTTGTTAACCCTCAAGAAGACTATAATCACTGGTCTCAGAGATATACCTTCCGAGTCAACGATTTTCTTTATTTCAAGTTCGAGAGAGGAAAAGATTCGGTGCTGATAGTGAGTAAAGAAGACTACGATTCATGCAACACAGAAAAGCCCTTGCACAGATTCAGAGGAGGAAGATCTGGATCTACGATCCCCTTGAATAGGTCTGGTCCCTTTTACTTCGTCAGCGGTAACCAACAAAACTGCAAGCAAGGCCAGAAGTTCGTCGTTCAAGTCTCCGCCTCCGTTCTTCCGCCGACGCAGCCGCCGTCATCAACACCGTCGAAGTCGCCTCAACCTTCCCCATGGATAGCGTCTCCTGTCCATTCTCCGGGATTGGTTCCGGCTCCAGCTCCTGCTCCGGCCGGAAACGCCGCTTCGTCTAGGTCTTTTGGTGTGGCTTTGGGAATATTTAGCTTTGTGGTGGCACTATTGATCTAA 597 0.4791 MAIHSSIKGLVGLFVVVIVVSSSSFEASATTFNVGGKSGWVVNPQEDYNHWSQRYTFRVNDFLYFKFERGKDSVLIVSKEDYDSCNTEKPLHRFRGGRSGSTIPLNRSGPFYFVSGNQQNCKQGQKFVVQVSASVLPPTQPPSSTPSKSPQPSPWIASPVHSPGLVPAPAPAPAGNAASSRSFGVALGIFSFVVALLI* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1260 198 ProSiteProfiles Phytocyanin domain profile. 30 133 IPR003245 GO:0009055
Amo08g1260 198 PANTHER BLUE COPPER PROTEIN 2 149 IPR039391 GO:0009055
Amo08g1260 198 PANTHER EARLY NODULIN-LIKE PROTEIN 2 2 149 - -
Amo08g1260 198 Pfam Plastocyanin-like domain 40 125 IPR003245 GO:0009055
Amo08g1260 198 MobiDBLite consensus disorder prediction 139 157 - -
Amo08g1260 198 Gene3D - 28 135 IPR008972 -
Amo08g1260 198 SUPERFAMILY Cupredoxins 29 131 IPR008972 -
Amo08g1260 198 MobiDBLite consensus disorder prediction 138 162 - -
Amo08g1260 198 CDD OsENODL1_like 30 131 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1260 Amo-Chr8 20624423 20625191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1260 13 178 Phytocyanin Superfamily AT4G28365 42.857 1.15e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1260 - - adu:107462217 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1260 08 20624423 20625191 Amo03g0551 03 10134278 10135677 PCT
Amo03g0551 03 10134278 10135677 Amo08g1260 08 20624423 20625191 PCT