Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1246 ATGAAGATGATGATGATGGTTCATGATATTCATACCTTGTTCTTCTTCATGGCCATTCTCAATCTTAACATAGCTCTTTTGAGTTGTGTGTCAGCAACTGAATTTGTGTATAACAGAAACTTCAACTCTACAAACACCAAGCTCTATGGAAATGCCACAATCCAAAATTCCATTCTCTCTCTCACTAACCAAACTTACTTTTCCATTGGCCGTGCCTTTTACCCTTTCAAGATACCAATGAAGAAACAATCAAATTCTACCCTTCTTCCCTTTTCAACTTCTTTCATATTCTCCATTGCTCCTATCAAGAACTTCCCCATTGCTCATGGCTTTGCTCTCTTCTTCACTCCTGTCATGGCCATCCATGGTGAACTCTCAGGGAACTACATGGGACTATTTAACCGTTCCACAGCAGGTAACGCCTCAAACCATGTATTTGCCATTGAGTTTGATGATTTTAGGAATGAGGAGTTCAATGAATTGAATGATAACCATATTGGTGTTGATGTGAATTCAATGATGTCTGAGTATTCTGAACCTGCTGGGTTTTGGGGTGGGAAAGATGGTGAAACAATGGAGGAATTGAAGCTTGCTAGTGGTGAAAATTATCAGGTTTGGATTGAGTTTGATGGTTCACATATCAATGTTACTATGGCCATAGCAGGGCATAGGAAGCCTCAAAGGCCTTTGATTCATAATAAGCCTATTAACCTTTCTGGGGTTTTCTTGGATGAGATGTATGTGGGGTTTTCTGGGGCAACAGGGAGAATGGTTGATGAGTGTAGAATCTTGGCTTGGAGTTTTAGCAATTCGAATTTTTCGATCGGTGATGCCTTGCACACCAACCGTTTGCCTTTATTCGTGCATCCAAAGGCATTGGTTTATAGATCAAAATATTTCATTTTGGGGGTCATTTTTGGTGGATTGATAGTTATTGGTTGTGGTACTTTGGTGTTTATGAGTTTATTATTAAGATCCAAAGGAAAAAAAGGAGGGAAAGATGAACAGGTTGAAGATTGGGAATTGGAATATTGGCCTCACAGAATTAGCTATGAAGAGATTTGTGTTGCGACGAATGGATTCTCCGAGGAGAATGTGATTGGGAATGGGACAAGTGGGAGAGTTTACAAGGGAGTGTTGAAAGGTGTAGAAGTCGCGGTTAAGAGATTCAACCATGAAACTCAGCATGAGATGAGAGAGTTTCTGGCAGAGATCTCAAGCCTAGGGAGAATGAAACACAGGAATTTGGTTGGTTTCAGAGGGTGGAGCAAAAAAAAAGGAGGGAAATTGATCCTTGTATATGATTATATGGGGAATGAGAGCTTGGATAAGAGAATTTTCGAGTGTGAAGATGACACCATGATACTCAGCTGGGAACTCAGGCTCAGTGTGCTTCAAAATGTAGCTTGTGGAATTTTGTACCTACATGAAGGCTGGGAATTCGAGGTCTTGCATAGAGATATTAAAGCAAGTAATGTACTACTCGACAAGGATATGAACGCACGATTGGGAGATTTTGGCCTAGCCAGGCTGCACCGACAGGAAAACGTGTCTGACACAACAAGAGTGATTGGAACTCTGGGTTACATGGCACCAGAGCTAGTCCGAATTGGTCGACCATCAACCGCTACTGATGTGTACAGTTTTGGAATATTGATCTTGGAAGTGGTGTGTGGGAGAAGGCCTATTGTGGTAGATAAACCTGCATTGGTTGATTGGGTATTTTCCCTTATGGAGAAAGGGCAATTGAGTTTTGCCGTTGATGAGAGGCTGAAGAATCAAAGTGGTTTCAGCACTGAGGAAGTTGAGAGAGTGTTGCATTTGGGTTTGTTATGTGCAAGTTCAGACCCTGGTATTAGGCCAGCAATGAGGCAAGTGGTGAAAATTTTGGAAGGAATAAGAAACTGTGATTGTAATGATTCATGCATCAATATGAGTCTTCTTGGGAAAATAAACTCAGCGGCATCATGGTCTAGGAGTTCAACAAGTTCTGCCACTGTGAATTATCCTACTTTTGATGAAATTTTGCAGACTAATTACATTCCAATGTCTCTATTTCATTTCCTTGTTATCCTTCTTCATATTGTAACCACTCTGAACTTGGCTTCAGCCACTGAATTTGTCTACAACACAAATTTCAGCCACAAAAACATCAATTTATTTGGAAATGCAAGTATTGAATCCTCCATTCTAACTCTAACTAATCAGAGTTTCTTCTCCATAGGCCGCGCTTTCTATCCTCATAAAATACCTACCAAACAAGCCAACTCTTCAACTCTTCTCCCATTTGCAACCTCCTTCATCTTCTCTGTTTCCCCCATTAAAAACTTTGTTATTACTGGTCATGGTCTTGCTTTCATATTTGCACCATCAAGAGGTGTAAACGGCAGATCCTCGGCCGAGTATCTTGGCCTTTTCAATCTCAGCAATGAAGGCAGTCCCCAGAACCATGTTTTTGGAGTTGAATTCGACACGATTATGAATGAAGAGTTCGACGATATCGATGGAAATCATGTTGGCGTTGACATAAACTCGCTTGCTTCGACAATTTCACATGAGGCTGGATATTGGTGTGGGAATGATGATAAGGAGTTCAAGGTGTTGAAGATAAGCAATGGAGAGAATTATCAGGTATGGATTGAGTTCAAGCATTCACAGCTTAATGTTACTATGGCTAAGGCAGGACAAAAGAGGCCTCGAGCGCCTCTTATCAGTATAAACCTTAATGTTTCTGATGTTCTTATGGATGAAATGTATGTTGGTTTCAGTGCATCAACAGGAAAAATATTAGACAGGGTTAATATTCTTGCTTGGAGTTTTAGCAATTCAAATTTTTCAATTGGTGATGCTTTAGTGACTGACAACTTGCCTTCATTCTTCCTTCATAAAAGATGGTTTTCCGGATTAAGAGCCTTACTTCTTGGAGTAATCAGTGTGCTAATCATTGGTTGTGGCTCTACAGTGTTGTTTGTGCTATGCAGGCGAAACAAGAAAGGTGAAGAACTTGAAGACTGGGAGTTAGAGTATTGGCCTCATAGGATTAGTTTCCATGAGATTGATGCAGCGACTAGGGGGTTCTCTGAAGAGAACGTGGTTGGTAATGGCGGAAATGGGAAGGTATATAAAGGAGTTCTGCAAGGTGAAGAAGTAGCAGTGAAGAGAATTCTTCAAGAAAGAGAACAAGGGATGAGAGAGTTCTTGGCTGAGGTCTCAAGTCTTGGTAGAATGAGGCACAAAAACTTGGTTGGATTGAGAGGTTGGTGCAAGAAAGAAAAGGGAAACTTGATTCTTGTTTATGACTTGATGAACAATGGAAGTTTAGACAAAAGGATCTATGACAGTGACGAAAACATGATGCTATGTTGGGAAGAGAGGATAAATATTTTGAAAAATGTGGCTGCAGGGATTCTATACCTGCATGAGGGTTGGGAAGTTAAGGTTTTGCATAGGGACATCAAAGCAAGCAATGTTCTACTGGACAAGGACATGAATGCAAGGTTGGGAGATTTCGGATTGGCGCGAATGCATGATCATCATGGACAAGTAGCCACCACAACACAAGTATTAGGCACAGTAGGATACATAGCTCCTGAAGTAATTAGAACTGGAAGAGCATCAACACAATCTGATGTGTATGGTTTCGGAATAATGATGTTGGAAGTGCTTTGTGGAAGAAGGCCAATTGAAGAACACAAGCCAGGGCTACTTGAATGGTTGGTCTCCCTAACGGTGAATGGCCAGTTGCTTAGTGCTGTTGATCAGAGATTGAAGGCTAAGGGTGGATACACCATTGAAGAAGCTGAGAGGTTGCTTCATTTGGGTCTGTTATGTTCAAATTCAGACCCTAATAAGAGGCCAATGATGAGGCAGATTTTGAAAATGCTAGAAGGTGATATGGAAGGAGTTGATTCTGATGAAGAAAATATGGAGATCAGTTTACTAGGAAAAATAAAATCAGCATCAATGTGGTCTGATAATGAATGTACTTTTCCACAACCTACTTTGGATGAAATTAGGATATTCAGTTCTAGTTCTATGATGATTCCTAGAAGTGGCTCAGGTACCATTCCTCCAGAATTCTCAGAATCAGACATCATTAGAGAAGTTTGGAAAAGTTTTTTCATAATGTCTCTACTATACCTCGTTCTAATTCTTCACACTTTAACCACTTTGAACTCAGCTTCAGCCACTGAATTTGTCTACAACACAAACTTCAGCAACAAAAATATCACCTTATTTGGAAATGCCAGTATTCAGTCCTCCATTCTCACTCTTACAAACCAGAGTTTCTTCACAATTGGCCGTGCTTTTTACCCTCAAAGAATACGAACCAAACGATCCAACTCATCCACCCTTCTCCCCTTTGCAACCTCCTTTATATTCTCTCTTGCCCCCTTCAAAAACTTTGATGCTGGCCCTGGTTTTGCTTTCTTGTTCACACCATCAAGAGGTCTAAATGGCACAACCTCAAGTCAGTATCTTGGTCTCTTCAATCTCAGCAACGAAGGCAATCCACAGAACCATGTTCTTGGAGTTGAGTTTGACACTATTAGAAATGGAGAAGTATTTCAAGACATAAATGACAACCATGTTGGTGTTGACATAAACTCGCTCGTTTCCTCGGTTGCACATGAAGCAGGCTATTGGGGTGGGAAGGATGATAAGGAATTCAAGGTGTTGAAGATAAACAGTGGGGAGAATTATCAAGTATGGATTGAGTTCAACCACTCACAGTTAAACATTACTATGGCTAAGGCAGGAGAAACGCGGCCTAGAGTGCCTCTAATCAGTTCGAATGTTAATCTTTCTGAGGTTCTTGTGGAAGAAATGTATGTTGGTTTCAGTGCTTCAACAGGGAGGGCAATAGATAGTACTAAAATACTTGCTTGGAGTTTTAGCAATTCAAATTTTTCAATTGGTGATGCTTTAGTCACTGATAATTTGCCTTCATTTGTCTTTCATAAAAAGTGGTTTTCTGGATCAGGAGCTATAATTGTTGGAGTCTTCATTACTACAATTATTGGTGCTGGGTTTGTGTTGTTGATTTTCTGTAGGGAAAATAAGGCAAATGAAGAACTTGAAGAATGGGAATTGGAGTACTGGCCCCATAGGATTAGTTTCCATGAGATTGATGCAGCAACAAGGGGGTTCTCTGAACAGAATGTTGTTGGTAATGGAGCGAACGGGAAGGTATATAAAGGGATCTTGCAAGGTGAAGAAGTTGCAGTGAAGAGAATCCCTCAAGAAGGAGAAGGGATGAGAGAGTTCTTGGCTGAGCTCTCAAGTCTAGGAAGAATGAGGCATAAAAATTTGGTGGGGTTGAAAGGCTGGTGCAAGAAAGAGAAGGGAAACTTGATTCTTGTTTACGACTTCATGAACAATGGAAGTTTAGACCAAAGAATCTTCGAGTGCGAAGAGATAATGCTGCTAGGGTGGAAAGAGAGGATTGAGGTTTTGAAAGATGTGGCTGCAGGGATTCTTTACCTGCATGAGGGTTGGGAAGTTAAGGTCTTGCACAGGGACATCAAAGCGAGCAATGTTCTACTGGACAAGGACATGAATGCTAGGTTGGGAGATTTTGGATTGGCACGAATGCACAATCATCAAGGAGAAGTCGCCGCAACAACTAGAGTATTAGGGACAGTAGGATACATAGCTCCTGAAGTAATTAGAACAGGAAGGGTATCAACTCAATCTGATGTGTATGGTTTCGGAATCTTGGCATTGGAAGTGCTTTGTGGCAGAAGGCCTATTGAAGAACACAAGCCAGGGTTACTTGAATGGTTGATGTCCCTATCAGTGGCTGATCAGTTGCACAGTGCTGTAGATGAGAGGTTAAAGGCTAAAGGGGGATACTCTATTGAGGAAGCTGAGAAATTGCTTCATTTGGGTTTGCTTTGTTCAAATTCAGACCCTAATATGAGACCAATGATGAGGCAAGTTGTGAAAATGCTGGAGGGGGAAATGGAAGGTGTTGAGTCTAATGAAGAAAGTGCAGAGATGGGTTTACTTGCAAAAATAAAATCAGCAGCAATGTGGTCTAAAAGTGAGTGTACCTTTCCACATAATGATTATCCAACCATGGATGAG 6090 0.4095 MKMMMMVHDIHTLFFFMAILNLNIALLSCVSATEFVYNRNFNSTNTKLYGNATIQNSILSLTNQTYFSIGRAFYPFKIPMKKQSNSTLLPFSTSFIFSIAPIKNFPIAHGFALFFTPVMAIHGELSGNYMGLFNRSTAGNASNHVFAIEFDDFRNEEFNELNDNHIGVDVNSMMSEYSEPAGFWGGKDGETMEELKLASGENYQVWIEFDGSHINVTMAIAGHRKPQRPLIHNKPINLSGVFLDEMYVGFSGATGRMVDECRILAWSFSNSNFSIGDALHTNRLPLFVHPKALVYRSKYFILGVIFGGLIVIGCGTLVFMSLLLRSKGKKGGKDEQVEDWELEYWPHRISYEEICVATNGFSEENVIGNGTSGRVYKGVLKGVEVAVKRFNHETQHEMREFLAEISSLGRMKHRNLVGFRGWSKKKGGKLILVYDYMGNESLDKRIFECEDDTMILSWELRLSVLQNVACGILYLHEGWEFEVLHRDIKASNVLLDKDMNARLGDFGLARLHRQENVSDTTRVIGTLGYMAPELVRIGRPSTATDVYSFGILILEVVCGRRPIVVDKPALVDWVFSLMEKGQLSFAVDERLKNQSGFSTEEVERVLHLGLLCASSDPGIRPAMRQVVKILEGIRNCDCNDSCINMSLLGKINSAASWSRSSTSSATVNYPTFDEILQTNYIPMSLFHFLVILLHIVTTLNLASATEFVYNTNFSHKNINLFGNASIESSILTLTNQSFFSIGRAFYPHKIPTKQANSSTLLPFATSFIFSVSPIKNFVITGHGLAFIFAPSRGVNGRSSAEYLGLFNLSNEGSPQNHVFGVEFDTIMNEEFDDIDGNHVGVDINSLASTISHEAGYWCGNDDKEFKVLKISNGENYQVWIEFKHSQLNVTMAKAGQKRPRAPLISINLNVSDVLMDEMYVGFSASTGKILDRVNILAWSFSNSNFSIGDALVTDNLPSFFLHKRWFSGLRALLLGVISVLIIGCGSTVLFVLCRRNKKGEELEDWELEYWPHRISFHEIDAATRGFSEENVVGNGGNGKVYKGVLQGEEVAVKRILQEREQGMREFLAEVSSLGRMRHKNLVGLRGWCKKEKGNLILVYDLMNNGSLDKRIYDSDENMMLCWEERINILKNVAAGILYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLARMHDHHGQVATTTQVLGTVGYIAPEVIRTGRASTQSDVYGFGIMMLEVLCGRRPIEEHKPGLLEWLVSLTVNGQLLSAVDQRLKAKGGYTIEEAERLLHLGLLCSNSDPNKRPMMRQILKMLEGDMEGVDSDEENMEISLLGKIKSASMWSDNECTFPQPTLDEIRIFSSSSMMIPRSGSGTIPPEFSESDIIREVWKSFFIMSLLYLVLILHTLTTLNSASATEFVYNTNFSNKNITLFGNASIQSSILTLTNQSFFTIGRAFYPQRIRTKRSNSSTLLPFATSFIFSLAPFKNFDAGPGFAFLFTPSRGLNGTTSSQYLGLFNLSNEGNPQNHVLGVEFDTIRNGEVFQDINDNHVGVDINSLVSSVAHEAGYWGGKDDKEFKVLKINSGENYQVWIEFNHSQLNITMAKAGETRPRVPLISSNVNLSEVLVEEMYVGFSASTGRAIDSTKILAWSFSNSNFSIGDALVTDNLPSFVFHKKWFSGSGAIIVGVFITTIIGAGFVLLIFCRENKANEELEEWELEYWPHRISFHEIDAATRGFSEQNVVGNGANGKVYKGILQGEEVAVKRIPQEGEGMREFLAELSSLGRMRHKNLVGLKGWCKKEKGNLILVYDFMNNGSLDQRIFECEEIMLLGWKERIEVLKDVAAGILYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLARMHNHQGEVAATTRVLGTVGYIAPEVIRTGRVSTQSDVYGFGILALEVLCGRRPIEEHKPGLLEWLMSLSVADQLHSAVDERLKAKGGYSIEEAEKLLHLGLLCSNSDPNMRPMMRQVVKMLEGEMEGVESNEESAEMGLLAKIKSAAMWSKSECTFPHNDYPTMDE 2030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1246 2030 SUPERFAMILY Protein kinase-like (PK-like) 1693 1986 IPR011009 -
Amo08g1246 2030 Gene3D - 703 948 - -
Amo08g1246 2030 ProSitePatterns Protein kinases ATP-binding region signature. 1032 1053 IPR017441 GO:0005524
Amo08g1246 2030 ProSiteProfiles Protein kinase domain profile. 1026 1302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1246 2030 CDD STKc_IRAK 1032 1297 - -
Amo08g1246 2030 SUPERFAMILY Concanavalin A-like lectins/glucanases 1395 1637 IPR013320 -
Amo08g1246 2030 PANTHER - 683 1341 - -
Amo08g1246 2030 ProSiteProfiles Protein kinase domain profile. 361 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1246 2030 PANTHER - 21 679 - -
Amo08g1246 2030 PANTHER - 1378 2028 - -
Amo08g1246 2030 Gene3D - 1395 1644 - -
Amo08g1246 2030 Pfam Legume lectin domain 33 272 IPR001220 GO:0030246
Amo08g1246 2030 Pfam Legume lectin domain 1397 1636 IPR001220 GO:0030246
Amo08g1246 2030 Pfam Legume lectin domain 705 944 IPR001220 GO:0030246
Amo08g1246 2030 SUPERFAMILY Protein kinase-like (PK-like) 1002 1296 IPR011009 -
Amo08g1246 2030 ProSiteProfiles Protein kinase domain profile. 1717 1989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1246 2030 PANTHER LECTIN RECEPTOR KINASE 683 1341 - -
Amo08g1246 2030 PANTHER LECTIN RECEPTOR KINASE 1378 2028 - -
Amo08g1246 2030 Gene3D - 31 279 - -
Amo08g1246 2030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Amo08g1246 2030 Pfam Protein kinase domain 362 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1246 2030 Pfam Protein kinase domain 1718 1983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1246 2030 Pfam Protein kinase domain 1027 1293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1246 2030 SUPERFAMILY Protein kinase-like (PK-like) 338 631 IPR011009 -
Amo08g1246 2030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1147 1159 IPR008271 GO:0004672|GO:0006468
Amo08g1246 2030 CDD STKc_IRAK 1723 1987 - -
Amo08g1246 2030 ProSitePatterns Protein kinases ATP-binding region signature. 367 388 IPR017441 GO:0005524
Amo08g1246 2030 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Amo08g1246 2030 CDD lectin_legume_LecRK_Arcelin_ConA 33 271 IPR001220 GO:0030246
Amo08g1246 2030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1837 1849 IPR008271 GO:0004672|GO:0006468
Amo08g1246 2030 SUPERFAMILY Concanavalin A-like lectins/glucanases 705 943 IPR013320 -
Amo08g1246 2030 Gene3D Transferase(Phosphotransferase) domain 1 1792 2008 - -
Amo08g1246 2030 Gene3D Transferase(Phosphotransferase) domain 1 1102 1315 - -
Amo08g1246 2030 Gene3D Transferase(Phosphotransferase) domain 1 437 646 - -
Amo08g1246 2030 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 274 IPR013320 -
Amo08g1246 2030 SMART serkin_6 361 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1246 2030 SMART serkin_6 1717 1985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1246 2030 SMART serkin_6 1026 1295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1246 2030 CDD lectin_legume_LecRK_Arcelin_ConA 1397 1635 IPR001220 GO:0030246
Amo08g1246 2030 CDD lectin_legume_LecRK_Arcelin_ConA 705 943 IPR001220 GO:0030246
Amo08g1246 2030 ProSitePatterns Legume lectins beta-chain signature. 1510 1516 IPR019825 -
Amo08g1246 2030 ProSitePatterns Protein kinases ATP-binding region signature. 1723 1744 IPR017441 GO:0005524
Amo08g1246 2030 CDD STKc_IRAK 367 633 - -
Amo08g1246 2030 Gene3D Phosphorylase Kinase; domain 1 1682 1791 - -
Amo08g1246 2030 Gene3D Phosphorylase Kinase; domain 1 990 1101 - -
Amo08g1246 2030 Gene3D Phosphorylase Kinase; domain 1 325 436 - -
Amo08g1246 2030 PANTHER LECTIN RECEPTOR KINASE 21 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1246 Amo-Chr8 20339364 20347829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1246 30 586 Receptor kinase-like Gene Family AT4G04960 53.036 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo08g1246 Pkinase 5.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1246 - - mtr:MTR_2g090410 1833.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1246 08 20339364 20347829 Amo03g0578 03 10533045 10538335 PCT