Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1230 ATGGAGACTGTTATTTCCAACCAATCCCCACCAACTATCCTCAAGAGTGTGAAGGACAAAGAGGAGGAGGAATCATTGCTTGGACAAGCGGAGATATGGAAGTACATGACATGCTTTACCGACTCCTTTGCCCTAAAATGCGCCGTTGAACTCCGCATCGCCGACATCATAGACCGCTACGGCAAGCCCATCTCCCTCTCCAAGATCATCGACAACATCGAGGACGCCCCGTCCCCGGATGCCTCTCTCCTCCTCCGCATCATGAGAGTCCTTGTCCGCAAGAAGATCTTCTCTGCTAACAAGTCCGACAACGGAGAGATCCTCTACGGCCTCACGCGCGCTTCCAAGTGGATCCTGCAAGACACCAAGATGACCCTCGCACCAATGTTGCTCTTAGAGAACCACCCTCTTCACCTCAACCCTGCACACTTCATCAGTGATATCATCAGGGAAGGAACTGACAAGGGAACTGCCTTCTTCAGGTGCCATGGACACGAGCAGTTCGACTTGACGGGATTGGACCCAGAGTACAACAAGTTGTTCAACGAAGGTATGGTGTGCACGGCAAGGACGGTGATAAAGGCTGTAATCGAAGGGTACAAAGAAGGATTCAACAAGATTGAGTCACTAGTTGATGTGGGTGGTGGACTTGGTGGTTCACTCTCTGAAATTGTGAGGGCTTATCCTCACATCAAGGGTATCAACTTCGACTTGCCGCATGTTGTTGCCACCGCCCCTCAGTACGACGGGATCACTCACGTTGGAGGTGACATGTTCGTCTCTGTTCCCAAAGCCGATGCCATTTACATGAAGTGGATTCTGCATGATTGGAGTGACCAACACTGCATAAAGATCTTGAAGAACTGTAGGAAGGCAATACCAGAGAACGGGAAGGTGATAATCGTGGACCATGTTCTGCAGCCAGAAGGAAACGATCTATTCGACGACACCGGCTTCGCTTTCGATATGATGCTTCTTGCACACAATGCCGGAGGAAAGGAAAGGACTGAGGAGAATTGGAAATGGCTGTTTGCTGAAACTGGATTCCCTCGTTACAACATCATCAAGATCAAGGCCCTTCCATCCATCATTGAGGCCTTCCCAAATTAA 1110 0.4991 METVISNQSPPTILKSVKDKEEEESLLGQAEIWKYMTCFTDSFALKCAVELRIADIIDRYGKPISLSKIIDNIEDAPSPDASLLLRIMRVLVRKKIFSANKSDNGEILYGLTRASKWILQDTKMTLAPMLLLENHPLHLNPAHFISDIIREGTDKGTAFFRCHGHEQFDLTGLDPEYNKLFNEGMVCTARTVIKAVIEGYKEGFNKIESLVDVGGGLGGSLSEIVRAYPHIKGINFDLPHVVATAPQYDGITHVGGDMFVSVPKADAIYMKWILHDWSDQHCIKILKNCRKAIPENGKVIIVDHVLQPEGNDLFDDTGFAFDMMLLAHNAGGKERTEENWKWLFAETGFPRYNIIKIKALPSIIEAFPN* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1230 369 Pfam Dimerisation domain 44 92 IPR012967 GO:0046983
Amo08g1230 369 SUPERFAMILY "Winged helix" DNA-binding domain 22 121 IPR036390 -
Amo08g1230 369 Gene3D Vaccinia Virus protein VP39 120 369 IPR029063 -
Amo08g1230 369 PANTHER O-METHYLTRANSFERASE 20 368 IPR016461 GO:0008168
Amo08g1230 369 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 20 368 - -
Amo08g1230 369 Pfam O-methyltransferase domain 146 349 IPR001077 GO:0008171
Amo08g1230 369 Gene3D - 14 118 IPR036388 -
Amo08g1230 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 368 IPR016461 GO:0008168
Amo08g1230 369 PIRSF O-mtase 12 369 IPR016461 GO:0008168
Amo08g1230 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 366 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1230 Amo-Chr8 20151969 20156298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1230 43 355 Monolignol Biosynthesis Gene Families AT5G54160 41.433 2.54e-80 248