LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo08g1217	ATGGACATCCTTAAACGGAGCTCAGGAATATGGGCATCTGAACTAGTATCAAACCTAGACAAAATGTGTGACAACCTCGAATCCACACTCTCCAATTCCTCTTCCGCAAGCTACCTTTTCCCTTTACAGCAGTTCCTCTTCACCTTCCTCACCAAGACCCTCTCCGGAGCCGACCCTTCCGTCGACGCCAAGATCGCGGACGGCGGCTACCTTATGTTTGACCGCTGGTTGGCCCTTCAGCTCCTGCCCACAGTCCCCATAGGCATTCTCCAGCCGTTAGAGGAGATCTTCCTCCACTCATACGCATACCCTTTCTTCCTTGTCAGTGGTGACTACAACAACCTCTACAACTTCATCAAACAACATGGGAAGGAGGTTGTAAACAGAGGCAAGCTCGAGTTTGGGTTGACCGAAGAAGAAGCCATTCACAACCTTCTCTTCGTGCTTGGATTCAACGCATTCGGAGGCTTCTCCGTATTCCTCCCAAGCCTGATTGACGCCATAGCCACCGACACCACAGGCTTACAACGCAAACTGGCAAAGGAAGCAAGGGAAAATGGCGGGTCAACCCTCACCCTCAACTCGGTCAAAGACATGCCACTCATCAACTCCGTCGTCTACGAGGTGCTCCGCCTCAACCCACCGGTTCCCCTCCAGTACGCCCGCGCAAGAAAGGATTTCACACTGAGTTCACACGACTCGGCCTTCCGAGTCACCAAGGGCGAGTTACTCTGCGGCTACCAGAAACTTGTTATGCGGGACCCACTTGTGTTTCAAGAACCGGAGAGTTTTAAGCCGGACCGGTTCGCTAACGGTGGGGCCCAATTGTTGGACTACTTATTTTGGTCCAATGGGCCTCAGAGTGGGTCCGCCACTTCGTCCAATAAGCAGTGCGCTGGAAAAGACATTGTGCCCCTTACTGCTGCTTTGATTGTAGCCCACTTGTTTCGTAGGTATGATTCTATTGAGGGGAATTCTAGTTCCATCACTGCCCTTCAGAGGGCCAAATGA	1011	0.5213	MDILKRSSGIWASELVSNLDKMCDNLESTLSNSSSASYLFPLQQFLFTFLTKTLSGADPSVDAKIADGGYLMFDRWLALQLLPTVPIGILQPLEEIFLHSYAYPFFLVSGDYNNLYNFIKQHGKEVVNRGKLEFGLTEEEAIHNLLFVLGFNAFGGFSVFLPSLIDAIATDTTGLQRKLAKEARENGGSTLTLNSVKDMPLINSVVYEVLRLNPPVPLQYARARKDFTLSSHDSAFRVTKGELLCGYQKLVMRDPLVFQEPESFKPDRFANGGAQLLDYLFWSNGPQSGSATSSNKQCAGKDIVPLTAALIVAHLFRRYDSIEGNSSSITALQRAK*	337

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo08g1217	336	PANTHER	CYTOCHROME P450 26	2	327	-	-
	Amo08g1217	336	Pfam	Cytochrome P450	175	320	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo08g1217	336	Gene3D	Cytochrome P450	1	333	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo08g1217	336	PANTHER	INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED	2	327	-	-
	Amo08g1217	336	SUPERFAMILY	Cytochrome P450	12	320	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo08g1217	336	PRINTS	E-class P450 group IV signature	199	215	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo08g1217	336	PRINTS	E-class P450 group IV signature	236	250	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo08g1217	336	PRINTS	E-class P450 group IV signature	252	270	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo08g1217	Amo-Chr8	20023984	20025460	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo08g1217	1	336	Cytochrome P450	AT4G15440	56.765	2.62e-140	400

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo08g1217	K10528		-	gmx:100784395	488.804

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo18g0766	18	10795382	10799555	Amo08g1217	08	20023984	20025460	hybridization