Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1205 ATGATCTCCAATAATAACAAGAACAATGAGGATGGTGAGGAGTCTTGGAGAGATGATTTGAGAAAGGGGCCTTGGACGCCGAGAGAGGACGCCATACTTATCGAGCAGGTAGAGAAGTGTGGCAAAGGAGAAGTGGCAAAAGTTGTAGGCTTAGATGGTCGCCATCTAAATCCTGACTTGAAGAAGGGTCCTTTCTCTGAAGAAGAGGAGAAAACCATTTATGATCTTCATGCTAAGTATGGAAACAAATGGGCTCTAATGGCTACCAAGGTTCCTGGAAGATCAGACAATGACATCAAAAATTTTTGGAACTCAAGAATGAAGAAGCGCCTAAGAGAATATCCTCCACAAATAACGGTTCAACAAGCACAACACTTTTCTTCATCACCATTTTATTCGGTCTTAGCTTCATGTTACCCTAAAAATAATCTCAGTGTTGAACTACCTTTAAACATTTCTGCTGCCAATCCTCCACCACATCATAATCAGAAACAACCTAATAGAAATAATTCTTCTTCATTCTCTTGCACCAATAATAATGCAAGTTTTGTATTGCCATTAACCCCTGTGTTTCCTTATTGTAAGAGTAGTGGTTTATTGAATGATGTGGTGATGGAGGGTATTGCTCTTTGTCGCAAGGGAAAGTCAAAGATGGATGCAATCATTGTTATTGGTAAGGAGGAAGAAGAATTAGCTGATAAGAGAAAAATTATTGAAGAGCCACCATTGCCACCAGTTGGAACCAGTAAAGAGGAAGAAACAGCCACCATTATTGCAACTCAAAGCTCTTCTCATCAATTGATTTCAACAGTTGAATGA 819 0.3944 MISNNNKNNEDGEESWRDDLRKGPWTPREDAILIEQVEKCGKGEVAKVVGLDGRHLNPDLKKGPFSEEEEKTIYDLHAKYGNKWALMATKVPGRSDNDIKNFWNSRMKKRLREYPPQITVQQAQHFSSSPFYSVLASCYPKNNLSVELPLNISAANPPPHHNQKQPNRNNSSSFSCTNNNASFVLPLTPVFPYCKSSGLLNDVVMEGIALCRKGKSKMDAIIVIGKEEEELADKRKIIEEPPLPPVGTSKEEETATIIATQSSSHQLISTVE* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1205 272 MobiDBLite consensus disorder prediction 1 24 - -
Amo08g1205 272 Gene3D - 64 129 - -
Amo08g1205 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Amo08g1205 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 54 IPR017930 -
Amo08g1205 272 SUPERFAMILY Homeodomain-like 20 103 IPR009057 -
Amo08g1205 272 CDD SANT 64 104 IPR001005 -
Amo08g1205 272 Pfam Myb-like DNA-binding domain 62 105 IPR001005 -
Amo08g1205 272 SMART sant 61 109 IPR001005 -
Amo08g1205 272 SMART sant 21 58 IPR001005 -
Amo08g1205 272 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Amo08g1205 272 Gene3D - 19 57 - -
Amo08g1205 272 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 186 - -
Amo08g1205 272 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1205 Amo-Chr8 19860240 19863685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1205 20 121 MYB Transcription Factor Family AT2G32460 52.941 2.13e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo08g1205 Myb_DNA-binding 3.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1205 K09422 - ahf:112705247 512.686