Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1203 ATGATCTCCAATAATAACAAGAACAATGAGGATGGTGAGTCTTGGAGAGATGATTTGAGAAAGGGGCCTTGGACGCCGAGAGAGGACGCCATACTTATCGAGCAGGTAAGAAGTAATTCTGAGTTGAGGAGAAGTGGCAAAAGTTGTAGGCTTAGATGGTCGAACCATCTAAATCCTGACTTGAAGAAGGGTCCTTTCTCTGAAAAAGAGGAGAAAACCATTGATGATCTTCATGCTAAGTTTGGAAACAAATGGGCTCTAATGGCTACCAAGAAGAAGACGACTGGGGCAGTAGAGAAATGCCATCGCACTTCGCTGAGAGTCGTCGTTGAGAAGCAATCGAATAGAGGAGCTTTTTCATGGGGCAAGGTGACTTTGAGGTTGGTGAGTGGTGTCGGTGGCTGGGTTGTGCCTCAGCCTCACTGGATGCCTTCAATCTTCATTGTGCACTACATGAATGCGTGCCCTAATTTTGAGAAGTGTATGTTCGCCGGGCCGGGTCTGGACAATGACATCAAAAACTTTTGGAACTCAAGAATGAAGAAGCGCCTAAGAGAATATCCTCCACAAATAACGGTTCAACAAGCACAACACTTTTCTTCATCACCATTTTATTCGGTCTTAGCTTCATGTTACCCTAAAAATAATCTCAGTGTTGAACTACCTTTAAACATTTCTGCTGCCAATCCTCCACCAAATCATAATCAGAAACAACCTAATCAAAATGATTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTTGCACCAATAATAATGCAAGTTTTGTATTGCCATTAACCCCTGTGTCTCCTTATTGTAAGAGTAATGGTTTATTGAATGATGTGGTGATGGAGTGTAATGCTCTTTGTCGCAAGGGAAAGTCAAAGATGGATGCAACCATTGTTATTGGTAGGGAGGAAGAAGAATTAGCTGATAAGAGAAAAATTATTGAAGAGCCACCATTGCCACCAGTTGGAACCAGTAAAGAGCAAGAAACAGCCACCATTATTGCAACTCAAAGCTCTTCTCATCAATTGATTTCAACAGAGAAGAATGATAATGGAGGTTGTAACAATAACAAGGAGGCATTGAATAATTCTATGCCACAAATGGACGATGAATTGCTTAGCATACTTAAAAATTGTCCAATATATTCGCCAGTGCGAAAGTGGTACAAAGTTGATGATGATGAGGACTCCTTGATGATGATGGAGATTTGA 1218 0.4113 MISNNNKNNEDGESWRDDLRKGPWTPREDAILIEQVRSNSELRRSGKSCRLRWSNHLNPDLKKGPFSEKEEKTIDDLHAKFGNKWALMATKKKTTGAVEKCHRTSLRVVVEKQSNRGAFSWGKVTLRLVSGVGGWVVPQPHWMPSIFIVHYMNACPNFEKCMFAGPGLDNDIKNFWNSRMKKRLREYPPQITVQQAQHFSSSPFYSVLASCYPKNNLSVELPLNISAANPPPNHNQKQPNQNDSSSSSSSSFSCTNNNASFVLPLTPVSPYCKSNGLLNDVVMECNALCRKGKSKMDATIVIGREEEELADKRKIIEEPPLPPVGTSKEQETATIIATQSSSHQLISTEKNDNGGCNNNKEALNNSMPQMDDELLSILKNCPIYSPVRKWYKVDDDEDSLMMMEI* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1203 405 Gene3D - 18 63 - -
Amo08g1203 405 Pfam Myb-like DNA-binding domain 24 72 - -
Amo08g1203 405 MobiDBLite consensus disorder prediction 1 22 - -
Amo08g1203 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 61 IPR017930 -
Amo08g1203 405 ProSiteProfiles Myb-like domain profile. 16 57 IPR001005 -
Amo08g1203 405 MobiDBLite consensus disorder prediction 224 251 - -
Amo08g1203 405 Gene3D - 65 184 - -
Amo08g1203 405 SMART sant 20 59 IPR001005 -
Amo08g1203 405 SMART sant 62 108 IPR001005 -
Amo08g1203 405 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 275 - -
Amo08g1203 405 CDD SANT 23 57 IPR001005 -
Amo08g1203 405 SUPERFAMILY Homeodomain-like 22 87 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1203 Amo-Chr8 19817980 19821165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1203 19 91 MYB Transcription Factor Family AT2G32460 60.714 9.17e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1203 K09422 - ahf:112708392 425.246