Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1183 AAAGGAACTACCTTTGCAGATTCTATTGTTGATCCTAAACCAAATGTTTTGAGAATTGGAGCACTCTTTACTGTCAACTCTGTCATTGGAAGAACAGCTAGACCTGCAATACTTGATGCTATTGATGATGTTAATGCCAACACAAGCATTCTCCCTTACACTAAACTTGAACTTGTCTTGCATGATACAGATTGCAGCAGGTTTCTTGGAATAGCAGAAGATGAGAACTCGAATCAACTCTCACTGAGAAGTTTCTGGGGCCTCTTCCTTGTATGTGGCATTGCATGCTTCCTTGCTTTGATTGTATTCTTTTGTCAGTACTCCAAATTCAGACCAAAGGCTAAGCAATCAGATGATGAAGAAATTCAATCAACAAGGCCTAAAATCAAAATTGCTAGTTTCAAGGACTTGATTGAATTTGTGGATAAGAGAGAAGCAGAAATTAAAGAGATACTTAAGCACAAGAGTGATAAAAGTGCAAGTTTAGTGGTGAATCAATCTAACTCCTAG 510 0.3784 KGTTFADSIVDPKPNVLRIGALFTVNSVIGRTARPAILDAIDDVNANTSILPYTKLELVLHDTDCSRFLGIAEDENSNQLSLRSFWGLFLVCGIACFLALIVFFCQYSKFRPKAKQSDDEEIQSTRPKIKIASFKDLIEFVDKREAEIKEILKHKSDKSASLVVNQSNS* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1183 169 SUPERFAMILY Periplasmic binding protein-like I 14 71 IPR028082 -
Amo08g1183 169 PANTHER GLUTAMATE RECEPTOR 3.4 11 71 - -
Amo08g1183 169 PANTHER GLUTAMATE RECEPTOR 3.4 73 155 - -
Amo08g1183 169 Gene3D - 14 80 - -
Amo08g1183 169 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 71 - -
Amo08g1183 169 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 73 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1183 Amo-Chr8 19519077 19522750 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1183 13 70 Ion Channels AT1G05200 48.276 4.84e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1183 K05387 - ahf:114925828 137.117