Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1157 ATGAAGTTTACAAGACCTGTTTATGCTGTTTTTTTTGTCTTTCTTCTTTGTGCCTTGGCCAAAATCGGCTTTGAAGGGAAACTGTGGAAACCCCAAGAGTTTTATGCAGATCATGGTGTTGTAATTAAGGAAGAGCAGGAGTGGATACATTGCAGGAAGGAATTGATAGAGAGGAACAATGATATTAAGGACTATGACTTGGAAATAAAAACAAACTTATTAGATTGCATTACAAGGACACATCCTCCAACTCATGATTCAGAAGAGAAGGAGCATGATCATGTGTCAGTGTCACAGTTTTATTCCGAAGACAATCGCGGTAGATACTTGCTTGACAAGTTACCTCAGAGTGAGAAGAAACTACCAAGACCTGTTCCTGTTCCATCACCCAAAAAACTGCGTGTCAAGAAGAAGTTTGCCAACTCGCTTCCGCCTCAAGGGATAACACTAAGTGCCATTTCTCCTTCTCCAAATTCTCCACCTATAGACTTTTATGTGCTATTTCCACCACCACCAGATTCACCTCCCCCTCCTCCTCCTCAAGTTGATGAGGAGGATAATAGCAAACGAAAGATACCAATTATCATTGGTTCGGTTGTATCAGGAATAATAATCATAGTAGGCATGCTCTTATGCTATCGTGAGATCAGGAAAAGCAGAAAAGTCTACAAAGATGACAGGCCTTTAACTGTATTAGGCTCAAGTGATGTGTCTGGTTCAAAGAAGTCTATTGCTTTGGGAAATTCTAATACCAATGAAAATGGTATAATCTATGTAAAGAACCCTTCTATTGTTGGGAATGTTACCACTAGCCCTGAAGATAACAATGCCTCATTGGGTATGGGTGTTGGTGTGGGTTTGGGTTTGGGTGTGGCTGCGGGTGAGGCCTCATCATCAGAAAGCAAGGAACAAGTTCCATTAGGTGCTGCTCCAGAAGGATTAGCCCCTGAGCCGGCAGGGCCACCACCCCCACCACCTCCACCACCTCCACCCCCTGCTGCTGCGCCTCGCCCCCCACCGGCTCCAAAAGCACCTGTTAGGCCTCCACCTGCCCCTCCTGTTAAAATCCTTTCACGGGCACGTCTTAGTAATGTAGAAGAGGATTCGGCGGATGCTCCGAAAGCGAAACTAAAGCCATTTTTCTGGGATAAGGTTGCTGCATCTCCTGATCAAGCAATGGTCTGGCATGAGATCAGAGCAGGGTCATTCCAGTTCAATGAACAGAAAATCGAGTCTTTATTTGGCTGCAACAACCCCAATAGAAAAGAGTCACCATCACAAGAACCTTCATTACAGTTAATTCAGATTATTGATCCTAAGAAAGCACAGAATTTATCAATTCTTTTACGTGCTTTGAATGTGACTACAGAAGAAGTTGTTGATGCCCTTAGAGAAGGTAGCGAGATTCCTGTTGAGCTGATCCAAACATTAATAAAGATGGCGCCAACAACAGATGAGGAACTGAAGCTGAGGTTATTTGATGGAAACATTGCTCAACTTGGCCCTGCAGAGCGGTTTCTCAAGGTCTTAGTTGACATTCCACTCGCTTTCCGGCGTCTCGAGTCTCTACAACTCATGCTCACTCTTCCAGAAGAGGTCTCAAGCATCAAGGAGTGCTTTTCAACATTAGAGGTTTCATGTGATAAACTAAGAAAAAGTAGGCTCTTCCTTAAACTACTAGAAGCAGTTCTCAAGACAGGAAACAGATTGAATGATGGAACATATCGTGGCGGCGCTCAAGCCTTCAAGCTTGACACACTTTTGAAGCTTTCGGATGTAAAAGGAACCGATGGAAAGACAACACTTCTACACTTTGTGGTTCAGGAGATCATACGTTCTGAGGGAGTAAGAGCTTTGAGAACAGAGAGAGCGAGGCAGAGCAATTCTAGTGTCAGAACAGAGGATTCTGTTGATGATTCCATTGGCCAAGAATCAGAAGAACACTACCGAAGACTTGGCCTTGAAGTAGTTTCAGGCCTAAGCAGTGAACTTGAAGATGTTAAAAGGGCGGCGATTATAGACGGCGATGCTCTAACGGCTGCAGTGTGGAAACTTGATCGGTTACTCAGCAAAAGTGAGGAGTTATTGAACAATGATTTGAAGAGCATAGATGAAGACAGCAACTTCAAGCGTTCCCTTGAAAATTTTGTGGACAAATCAAAAGCTCAAGTGTCATGGCTGTCTGAGGAAGAGAAGAGGATCATGGCTGAAGTGAAGGCTACAGCAGATTACTTCCATGGACAAGCAGGGAAAGATGAAGGTTTGAGATTGTTTGTAATTGTTCGTGATTTCTTGGTAATGTTGGACACAGTATGCAAAGAGGTGCAGTTAACAACACAGAAGCCAATGAAGATCTCTCATAAGAAAGAGGCTTCAAATTCGTCGTCGCCGCCAGTATCTCCGAATACTCAGCAGCAGTCTCCTTCTGATCTGCATAGAAGACTGTTTCCGGCCATAGCAGCGCGCAGGATCCATTGCTCAAGTTCAGATGAGGATGAGGATGAGGAAGAGGATAATTAG 2520 0.4405 MKFTRPVYAVFFVFLLCALAKIGFEGKLWKPQEFYADHGVVIKEEQEWIHCRKELIERNNDIKDYDLEIKTNLLDCITRTHPPTHDSEEKEHDHVSVSQFYSEDNRGRYLLDKLPQSEKKLPRPVPVPSPKKLRVKKKFANSLPPQGITLSAISPSPNSPPIDFYVLFPPPPDSPPPPPPQVDEEDNSKRKIPIIIGSVVSGIIIIVGMLLCYREIRKSRKVYKDDRPLTVLGSSDVSGSKKSIALGNSNTNENGIIYVKNPSIVGNVTTSPEDNNASLGMGVGVGLGLGVAAGEASSSESKEQVPLGAAPEGLAPEPAGPPPPPPPPPPPPAAAPRPPPAPKAPVRPPPAPPVKILSRARLSNVEEDSADAPKAKLKPFFWDKVAASPDQAMVWHEIRAGSFQFNEQKIESLFGCNNPNRKESPSQEPSLQLIQIIDPKKAQNLSILLRALNVTTEEVVDALREGSEIPVELIQTLIKMAPTTDEELKLRLFDGNIAQLGPAERFLKVLVDIPLAFRRLESLQLMLTLPEEVSSIKECFSTLEVSCDKLRKSRLFLKLLEAVLKTGNRLNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRALRTERARQSNSSVRTEDSVDDSIGQESEEHYRRLGLEVVSGLSSELEDVKRAAIIDGDALTAAVWKLDRLLSKSEELLNNDLKSIDEDSNFKRSLENFVDKSKAQVSWLSEEEKRIMAEVKATADYFHGQAGKDEGLRLFVIVRDFLVMLDTVCKEVQLTTQKPMKISHKKEASNSSSPPVSPNTQQQSPSDLHRRLFPAIAARRIHCSSSDEDEDEEEDN* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1157 839 MobiDBLite consensus disorder prediction 622 642 - -
Amo08g1157 839 PANTHER FORMIN-RELATED 1 834 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo08g1157 839 SUPERFAMILY Formin homology 2 domain (FH2 domain) 322 781 - -
Amo08g1157 839 Gene3D Formin, FH2 domain 372 802 IPR042201 -
Amo08g1157 839 MobiDBLite consensus disorder prediction 783 814 - -
Amo08g1157 839 SMART it6_source 367 783 IPR015425 -
Amo08g1157 839 MobiDBLite consensus disorder prediction 294 354 - -
Amo08g1157 839 MobiDBLite consensus disorder prediction 315 354 - -
Amo08g1157 839 PANTHER FORMIN-LIKE PROTEIN 1 834 - -
Amo08g1157 839 MobiDBLite consensus disorder prediction 789 811 - -
Amo08g1157 839 MobiDBLite consensus disorder prediction 80 99 - -
Amo08g1157 839 ProSiteProfiles Formin homology-2 (FH2) domain profile. 367 794 IPR015425 -
Amo08g1157 839 MobiDBLite consensus disorder prediction 81 99 - -
Amo08g1157 839 MobiDBLite consensus disorder prediction 163 182 - -
Amo08g1157 839 MobiDBLite consensus disorder prediction 163 187 - -
Amo08g1157 839 MobiDBLite consensus disorder prediction 622 636 - -
Amo08g1157 839 Pfam Formin Homology 2 Domain 370 768 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1157 Amo-Chr8 19220465 19224653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1157 321 824 FH2 protein (formin) Gene Family AT5G54650 55.635 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1157 - - lja:Lj3g3v2888350.1 643.269