Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1150 ATGGGCGATGGGGGTGTCGCGTGCATGCCTTTGCAGCATATCATGGACAAGACACTTTGCGAGGGCAAGAGTAGTGGTGGGAATAATGTGCTCAGTTCCAAGTTGCTCAAGCTTCCTGACGGTACCAGAGGGAGGAAGAAGAAGAAGAAGATGAAGCAGAGAAAAGACAAGGCGGTTAGTAGTGAATTGGGGTCTGACAGAGTAAACAAGAGGACTTGCGAGGTTGAGAATGGCGAAATTTGTGCTGAGAAGGTGCAGAAGGAGGAAGTGGAAGAGGGTGAATTGGGCACCTTGAAGTGGCCAAGAAATGACCTTGAGAATGGAGAGTTTGTGCCGGATATGCCACTTCCGCCACCTCCACCTTTGCCACGGCGGAGGAGTGAGATTGAGACTGGAGAGATCGTGAGCGACAAATGGAAAGCAAGGGAGCTGGAGAAGGGAGAGAATTCTCCTGGAAAATGGGAGAGAGAGGATGTGGAAAGAGGAGAAGTGGTTCCTGAGAAGGGTAGGAAAGGAGAAGCTGAGAAAGGTGAATATGGGTCCTGGAGAGGTATGAAGGATGATATTGAAAAGGGGGAGTTCATTCCGGATAGATGGTATAAGGGAGAAATGGGCAAGGATGATTATGGCAACAGTAGAATCCGCAGGTTCCATCCAGGTAGGGAAAAAGCCTGGAAAATCGAACGTGACCGGACTCCCCCTTCTGGAAGATTTGCTTCTGATGATTTTTATAGAAAGAAAGAGTTTAACAGAAGCGGGGGACAGTATGCTAAAAGTTCTCCCAGCTGGGAGAGTGGACAACAGAGGAGTGTGAGGATTAGTTCAAAGATTGTGGACGAAGGGAAAAATGTAAACAGCAATGGTAAGGATTATTCACGAGATTACAATCCTGGGACTCGCATGAAAAGGCTCAGTAATGATTCTGACAGCTCCGACAGGAAGCAATTTGGAGATTATGGCAGTTTAAAAAGTCGGAGGCTTTCTGATGACTTCCCTCGTCATGGTTATCCGGAGAACTATTCTCGCCGCTCTGTGGAGCGACCATACAGAAGTAGTAATCCTTCGAAGTTATCAGTAGACAAATATTCTTCCAGAAATCATGAATCTTCTGTGTCTTCAAGGCAAGCTTATGACAGGCATGGACACAGCCCTGGTCATTCTGACCGGTCCCCACGAGATCAGTCCAGGTATTATGATCATAGAGATCGCACTCCGTTGCGAAGGTCCCCCTCTGGCCGTGACAGATCTCCATATAGGCTGGAGACTTGCCGTGACAGATCTCCATATAGGCTCGAGAAATCCCCACACTGTCGGGAGAGATCCCCGTACGAGAGGAATTTTGACAGAAATCGTCAGCATGATCACAAATTCAAAAGTCCTACACAGGGAGTTCGTCCATCCCCCTGTGGTCGTGACAAATCACCTTACAGCAGGGAGAAATCCCCCCATGGTCGCGAGAGATCACCACATGAGAGGATGTGGGAGCGAAATCGACAGCATGATCATAAGTTCAAAAGTCCTCCCCATGCCGAGCGGTCACCACAGGATAGAGGCCGGCCCAATGATCGCAGGGACCATACTCCAAATTTAGTGGAAGGATCATCCCTTGATGGTAATAGAAAAAATAATGATCGAGAAACAATTTGTAAAACCTTACAAAGTGAAAAGCCTAACTCAGAATATAATTCTAAGGAACATGAAGATGATAAGCACAAGAGGGAGTCAAATTGTTCTGCTGCAGAATCTCAAAGTGAAAGAAATGTACCCAATACTGACGAGTCGACTGACAAAGATATCTCCAGTCAACCTACAAATGAACAGCTGCCCCGCAGCCCATCTATTAGCAAAGAATCTCCTCACATTGAGCTAGTTCCTGAGGAGCTTCCATCAATGGAAGAAGATATGGATATCTGTGATACCCCTCCACATGTCCCTATGGTGACTGATTCAGCATCTGGGAAATGGTTTTACCTTGATTATGGTGGCGTAGAAAATGGTCCTGCTAAACTCTCTGACATCAAGGTCCTTGTTGATGAAGGAGTACTGATGTCAGATCACTTTATTAAGCACTTAGATAGTGACAGATGGTTAACTGTTGAAAATGCGTCATCACCATTGGCGGCTCAGCCTTTTCAGTCCATTATGTCAGATGCCATTACTCAGCTAGTAAATCCTCCAGAAGCTCCTGGTAATCTCTTGGCAGATACTGGAGATGTTCTTCAATCTGGTCTTGACCAAAGTCAGGAAATGCCAGCCACTTTGCTGCGCTCTGATGACAACTTGCATGCATCTGAACTGTTGGAGGATCTCCACATTGATGAAAGGGTTGGAAGTCTGTTAGAAGGTTATGATGCCACTCCTGGGATGGAGCTTGAGGCAATAAAAGAGGCTCTGCAAATGAATTTTGAATATGCAAAATTGGAGGGATTGGAAGACTGTGAAGGTTTTCCTTGGCATGATTCCAGCCTCAGTGAAGATAGTGGTTCAAGAATTGATATTGCACCAAGAGATAATGAGATGAGCATGTCCTGTGAAAAGGATAATGGATTTGCTGCTCCTGATGACTGGTTTTCTTCCCGTTGGTCATGCAAAGGTGGGGATTGGAAGAGGAATGATGATGCCCAAGATAGATATTCTAGGAAGAAATTTGTCCTAAATGATGGATTTCCTTTATGCCTAATGCCAAAGTCTGGATGTGAAGATCCTCGCTGGCCTCATAAAGATGACTTGTATTTTCCTTCTCAGAGCAGGAAACTTGATCTCCCTTTGTGGGCTTTTTGTGCTGATGAGCGGGTTGATTACTGTGCTGCGAGCAGATCAGCTCAAAGCAAGCCTGCCTTTGTTAGAGGAACGAAAGGAAATGTTCTTTCAGTGGTTAGAATAAATGCATGTGTCGTCAAGGATCAGGGATCATTGATGTCTGAGTTACGGCACAAATCGCGAGGCAAAGATAGATATCATTCAAGGTCTACCCGACCTCATTCTTCTAGTAGTGACAGCAGGAGATCGTCAATTGAAGAGGATTCTCATTCAAAAGCTGCTAGTGATCGAGGTTCTCGCCGTAGCATGGAATTCATTAATGTCCCTAAAGATCATCTCTGTACTGTTAAGGATTTGCAGTTACATTTTGGGGACTGGTATTATCTTGATGGTTCTGGGCGTGAAAGAGGGCCATCATCATTTTTAGAACTGCAGCATTTAGTAGATCAAGGAATTATAAAAAAGCTTAGCAGTGTGTTTAGGAAAAGTGATAAACTATGGGTTCCTGTTACCTCTGCTACAGAAATTTCTGACGTTAGTCTTGGGAGCCACCAAGAAAGCAGTTCAACATCTGGAGTGCAATCAAAGCACATTCAGGATGTCTGTGTTGGTGAACCTTATGCAAATCTAAGTTTGTTTAACATCATACACCCTCAGTTTGTTGGTTACACTCGAGGGAAACTGCATGAACTGGTAATGAAATCATATAAGAGTCGGGAGTTTGCTGCAGCTATAAATGAGGTTTTAGATCCATGGATCAATGCAAGACAACCAAAGAAAGAAATTGAGAAGCAAATTTATTGGAAATCAGACGGTGATGCACGTGCTACCAAAAGAGCCCGGATGCTGGTTGATGGTGAGGAAGACAGTGAGTTTGAAGATGGTCCTACTATTGAGAAGGATGAAACCACGTTTGAGGATCTATGTGGTGATGCTACTTTCATTGGAGAAGCCATTGGTCTTACTGACTCTGAGGTGGCAACCTGGGGCTTATTGGATGGTCATATGTTAGCAAGAATATTCCATTTTCTGAGATCTGATTTGAAGTCCCTTGTTTTTGCATCAATAACTTGCAAGCATTGGAGAACTGCTGTACGTTTTTACAAAGAAGTCTCAAGACATGTCAATTTATCATCATTGGGTCACTCCTGCACTGACTCCATGTTGTTGAACATTATGGATGCTTATGACAAAGAAAAGATCAGTTCTATGACTCTAATGGGTTGTAAGAATATTTCGGCCGACACACTTGAGAAAATTCTTCTCTCTTTTCCTGGTTTGTCTACAATAGACATCAGAGGGTGCAGCCAGTTCGAAGAGCTGACTCCTAAATTTGTCCATGTGAAATGGATTAAGAGCCGATTTTTAGAGGAGTCCCATAAAATCAGAAGCCTTAAACACATTACAGATCAAACTTCATCTGTTTCAAAATCCAGCAGTTTAGGCATGGATGATTTTGGTCAGTTGAAGGATTACTTTGATAGTGTGGATAAGAGAGACACCGCAAAGCAATTGTTTCGTCGAAACTTATACAAGCGGTCAAAACTATATGATGCTAGAAGGTCCTCGTCCATTCTATCAAGGGATGCTCGTACAAGGCGATGGGCAATTAAGAAGTCTGAAAGTGGTTATAAGAGGATGGAGGAATTCCTTGCTTCAAGACTGAGAGAAATTATGAAGACAAACTCCTGTGATTTTTTTGTGCCTAAGGTTGCAGAAATTGAGGCTAGAATGAAAAATGGATATTATATTGGCCGTGGTTTGAGCTCTGTCAAGGAGGACATAAGTAGAATGTGCCGTGATGCTATAAAGGCAAAGAATCGGGGTGATGCTAATGACATGAATCGTATGATCACATTGTTTATTCAGCTTGCAACGCTGTTGGAAGAGAGCTCTATATCTGTGCATGACAGAGATGTGCTATCCTCAAAGTATAAGAAAAATAGATTGGTAACTGATAGGAAGTATAGGAGTAACGGAACACATGGATTGGACAATATGGAATATACCTCCGATCGGGAAATTAGGAGGCGCTTATCTAAGTTGAATAAGAAATCTATGGACTCAGAGAGTGAAACATCTGATGATCTTGATCGGTCTTATGAAGATGGCAAGAGTGACAGTGATACTACAACCTCTGAGGCTGAAAGTGATGACCAAGGACATTCAGAAAATCTAATTGGGGAGTCGAGGGGAGATGGACACTTCACACCGGAGGGAGATTTGAATTTTATAACTGATGATCGTGAGTGGGGTGCTCGCATGACTAAAGCCAGCCTTGTTCCCCCTGTTACTCGAAAATATGAAGTCATTGATCAATATGTCATTGTAGCTGATGAGGAAGATGTGCAAAGGAAGATGCGGGTTTCATTACCAGATGACTATGCAGAAAAGTTGAGTGCACAAAAGAATGGTACAGAGGAGTCAGATATGGAACTTCCTGAAGTCAAGGATTATAAACCTAGAAAGCAGCTTGGGAATGAAGTTATTGAGCAAGAAGTGTATGGAATTGATCCTTATACACATAATCTTTTGCTTGATTCGATGCCTGAGGAGTTAGATTGGTCCCTTCAGGACAAACATTTGTTCATAGAAGATGTGCTTCTTCGAACATTGAATAAGCAAGTCAGGAATTTTACTGGAAGTGGAAGCACTCCAATGAGCTATGCTCTGCAGCCTGTTATTGAAGAGATTAAAAGATGTGCAGAGGAGGGCTGTGATGCACGAACAGTTAAAATGTGTCAAGGTATTCTAAAGGCCATAGACAGTCGTCCAGATGACAAATATGTAGCTTATAGAAAGGGACTTGGTGTTGTTTGTAACAAGGAAGAAGGCTTTTCCGAAGATGATTTTGTTGTGGAATTTTTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATTCGATCTCTGCAGAAAAATAGTAAGGATCCGGCACCTGAATTCTATAACATCTACCTTGAGAGACCAAAGGGTGATGCTGATGGGTATGACTTGGTCGTTGTTGATGCCATGCATAAGGCTAATTATGCAAGCCGAATATGCCATTCTTGCCGACCAAATTGTGAAGCCAAAGTTACTGCTGTTGACGGTCATTATCAAATTGGGATTTATAGTGTTCGTAAAATTCAACCCGGTGAGGAGATCACTTTTGATTACAATTCTGTGACAGAGAGCAAGGAGGAATATGAAGCATCGGTTTGTTTATGTGGAAGTCAAGTATGCCGGGGGAGCTATCTCAATTTAACTGGTGAAGGGGCTTTCCAAAAGGTTTTGAAGGACTCGCATGGAATTCTTGATCGGCATTATTTGATGTTAGAAGCATGTGAATTGAATTCTGTGTCGGAAGAGGACTATAATGACTTGGGAAGAGCTGGTTTAGGAAGCTGTTTGCTTGAAGGCCTGCCAGATTGGCTTGTTGCATATGCGGCACGCCTTGTGAGGTTCATCAATTTTGAGAGAACCAAACTTCCTGAGGAAATTCTAAAGCATAATCTGGAAGAGAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAAAGGAGTGATGCTGAGGTTCAGGCTGAGGGTGTCTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGACAAGGTAAGATATGTTATGCGATGTATTTTTGGTGATCCCCGAAAAGCACCACCTCCTCTTGAGAAGATCAGTCCTGAAGCAGCTGTTTCCTTTCTCTGGAAAGGAGAGGGTTCTTTTGTTGAGGAGCTTCTTCAGTGTATTGCTCCTCACGTGGAAGAAGATGCCTTGAATGAACTGAGGTCTAAAATTGATGCTCACGATCCTTCAAGTTCTGGAGATATTCAAAAGGAGGTGCAGAAATCTCTATTATGGTTGAGGGATGAGGTCCGAGATCTTCTTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTACGCATATACCAAGTACTTCTTTAGAATACGGGCTTATGAAACCATTACTTCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACGCTAACAAGTTGGGAGCAGGATTTCAGGAGTATCGGAAAATATATGGTGAAAATTATTGTTTAGGGCAGTTGATTTTTTGGCACAATCAGAGTAATGTGGATCCAGATCATAGCCTTGGTAGAGCCAGCAGGGGTTGCCTGTCTTTACCAGACATCAGTTCCTTTTATGCCAAGGCTCTGAAGCCATCAAAGCATCGAGTTTATGGTCCAAGGACTGTAAGATCAATGCTTGCAAGAATGGAGAAGCAACCGCAGAGACCTTGGCCCAAGGACCAGATATGGACATTCAAAAGTTTTCCCAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAATAAATAACACACCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATACCAGGCCATGTGGGATCGTTAG 7227 0.4321 MGDGGVACMPLQHIMDKTLCEGKSSGGNNVLSSKLLKLPDGTRGRKKKKKMKQRKDKAVSSELGSDRVNKRTCEVENGEICAEKVQKEEVEEGELGTLKWPRNDLENGEFVPDMPLPPPPPLPRRRSEIETGEIVSDKWKARELEKGENSPGKWEREDVERGEVVPEKGRKGEAEKGEYGSWRGMKDDIEKGEFIPDRWYKGEMGKDDYGNSRIRRFHPGREKAWKIERDRTPPSGRFASDDFYRKKEFNRSGGQYAKSSPSWESGQQRSVRISSKIVDEGKNVNSNGKDYSRDYNPGTRMKRLSNDSDSSDRKQFGDYGSLKSRRLSDDFPRHGYPENYSRRSVERPYRSSNPSKLSVDKYSSRNHESSVSSRQAYDRHGHSPGHSDRSPRDQSRYYDHRDRTPLRRSPSGRDRSPYRLETCRDRSPYRLEKSPHCRERSPYERNFDRNRQHDHKFKSPTQGVRPSPCGRDKSPYSREKSPHGRERSPHERMWERNRQHDHKFKSPPHAERSPQDRGRPNDRRDHTPNLVEGSSLDGNRKNNDRETICKTLQSEKPNSEYNSKEHEDDKHKRESNCSAAESQSERNVPNTDESTDKDISSQPTNEQLPRSPSISKESPHIELVPEELPSMEEDMDICDTPPHVPMVTDSASGKWFYLDYGGVENGPAKLSDIKVLVDEGVLMSDHFIKHLDSDRWLTVENASSPLAAQPFQSIMSDAITQLVNPPEAPGNLLADTGDVLQSGLDQSQEMPATLLRSDDNLHASELLEDLHIDERVGSLLEGYDATPGMELEAIKEALQMNFEYAKLEGLEDCEGFPWHDSSLSEDSGSRIDIAPRDNEMSMSCEKDNGFAAPDDWFSSRWSCKGGDWKRNDDAQDRYSRKKFVLNDGFPLCLMPKSGCEDPRWPHKDDLYFPSQSRKLDLPLWAFCADERVDYCAASRSAQSKPAFVRGTKGNVLSVVRINACVVKDQGSLMSELRHKSRGKDRYHSRSTRPHSSSSDSRRSSIEEDSHSKAASDRGSRRSMEFINVPKDHLCTVKDLQLHFGDWYYLDGSGRERGPSSFLELQHLVDQGIIKKLSSVFRKSDKLWVPVTSATEISDVSLGSHQESSSTSGVQSKHIQDVCVGEPYANLSLFNIIHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQIYWKSDGDARATKRARMLVDGEEDSEFEDGPTIEKDETTFEDLCGDATFIGEAIGLTDSEVATWGLLDGHMLARIFHFLRSDLKSLVFASITCKHWRTAVRFYKEVSRHVNLSSLGHSCTDSMLLNIMDAYDKEKISSMTLMGCKNISADTLEKILLSFPGLSTIDIRGCSQFEELTPKFVHVKWIKSRFLEESHKIRSLKHITDQTSSVSKSSSLGMDDFGQLKDYFDSVDKRDTAKQLFRRNLYKRSKLYDARRSSSILSRDARTRRWAIKKSESGYKRMEEFLASRLREIMKTNSCDFFVPKVAEIEARMKNGYYIGRGLSSVKEDISRMCRDAIKAKNRGDANDMNRMITLFIQLATLLEESSISVHDRDVLSSKYKKNRLVTDRKYRSNGTHGLDNMEYTSDREIRRRLSKLNKKSMDSESETSDDLDRSYEDGKSDSDTTTSEAESDDQGHSENLIGESRGDGHFTPEGDLNFITDDREWGARMTKASLVPPVTRKYEVIDQYVIVADEEDVQRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKDYKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQDKHLFIEDVLLRTLNKQVRNFTGSGSTPMSYALQPVIEEIKRCAEEGCDARTVKMCQGILKAIDSRPDDKYVAYRKGLGVVCNKEEGFSEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYSVRKIQPGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLEGLPDWLVAYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKISPEAAVSFLWKGEGSFVEELLQCIAPHVEEDALNELRSKIDAHDPSSSGDIQKEVQKSLLWLRDEVRDLLCTYKCRHDAAADLIHIYAYTKYFFRIRAYETITSPPVYISPLDLGPKYANKLGAGFQEYRKIYGENYCLGQLIFWHNQSNVDPDHSLGRASRGCLSLPDISSFYAKALKPSKHRVYGPRTVRSMLARMEKQPQRPWPKDQIWTFKSFPKFFGSPMLDAVINNTPLDREMVHWLKHRPAIYQAMWDR* 2409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1150 2408 MobiDBLite consensus disorder prediction 580 614 - -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 1600 1663 - -
Amo08g1150 2408 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1989 2408 IPR045606 -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 305 345 - -
Amo08g1150 2408 SMART set_7 1844 1984 IPR001214 GO:0005515
Amo08g1150 2408 MobiDBLite consensus disorder prediction 346 371 - -
Amo08g1150 2408 SUPERFAMILY F-box domain 1249 1304 IPR036047 GO:0005515
Amo08g1150 2408 MobiDBLite consensus disorder prediction 472 530 - -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 976 1022 - -
Amo08g1150 2408 Gene3D SET domain 1813 2009 IPR046341 -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 253 282 - -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 201 252 - -
Amo08g1150 2408 ProSiteProfiles SET domain profile. 1839 1978 IPR001214 GO:0005515
Amo08g1150 2408 MobiDBLite consensus disorder prediction 201 621 - -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 126 187 - -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 91 187 - -
Amo08g1150 2408 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 464 2407 - -
Amo08g1150 2408 CDD SET_SETD2-like 1852 2000 - -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 21 67 - -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 989 1022 - -
Amo08g1150 2408 SUPERFAMILY SET domain 1853 2001 IPR046341 -
Amo08g1150 2408 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 464 2407 - -
Amo08g1150 2408 Pfam SET domain 1923 1978 IPR001214 GO:0005515
Amo08g1150 2408 MobiDBLite consensus disorder prediction 559 579 - -
Amo08g1150 2408 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 465 - -
Amo08g1150 2408 Gene3D Ribonuclease Inhibitor 1243 1397 IPR032675 -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 1600 1649 - -
Amo08g1150 2408 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 465 - -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 372 460 - -
Amo08g1150 2408 MobiDBLite consensus disorder prediction 288 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1150 Amo-Chr8 19172385 19185155 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo08g1150 SET 4.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1150 K22748 - gmx:100776205 3600.83