Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1136 ATGACAATCAATGAACAAAATGAAACGATGATAACTAACATGAGAACCCTCACTTTTCTTCTTCTACTCTTCCTTCTGTATGATTTTTTGCAGGCGCATTCTGCACAAGATACTCTAATCACCGGCCAAAGCATACCTAGAACTAGAAAAGTTCTTGCTTCAGCCGGTGAAAAATTCGTACTAGGCTTCTTCTCTCCTCTGGAAAACCCAGGTCAAAGTTACCTCGGAATATGGTACAACACCAACAGAACTTACCCAGGAAAAACAGTAATGGTTTGGGTTGCAAATAGAGACAATCCTGTTCTGGGTTCCAATGGTGGAGGAGTCTTCCAAATTGCACAAGATGGAAATCTTCTAGTCACAAATGAATCAGGGTCAACGTTCTGGTCTTCTAAACTTGATAAATCCAGTTCCAATAACAGAACAGTCAAGTTAACCGACTCTGGGAACTTAGTGTTGTTCCAGCATCATGATGATGATGGCAATGGAACAAGCTACATAATTTGGCAAAGCTTTCAATACCCAACAGACACGTTTCTTCCCGGAATGGAAATAGACAGAGCCATGGAACTTACTTCTTGGAGATACGACGGCGGTGGCGGTGGAAGAGAGAGCTTCTTCACCTTCAAGATGTCTCAAACAGGAAACAACCGTTTCAGAATCATGGATAGCCAAAACCAACTTCACTGGGAGAATGATGGACTCAATTCCAATGATTTGTCCCCTGATGTGCTTAACTACTTGACAAACTTCACCGATGCAGAAAATCGTCCATCCAAGTATGTCAACACAAACACTTCGAAATCGTTGTACTATTCATACCAAGACACAAGGATCGTGATGAACTCTACAGGAGAGTTACAATTTTGGAAGTGGGAAGAATCTGAATGGATCATGCAATGGAAACATCCTTCAAGCATGTGCAAGATACACAATTTCTGTGGTAACTTTAGCAGCTGCAACGTCGATGATTGGATGCCATGCAAGTGTTTGCCAGGGTTTAGGCTCGCTTCAGAGTATGAAACTCAGAGCTATGAAATGGGGATGAAATTCCCAGGATGTGTGAGAAAGTCAGAATCCCATGGCGACAACAGAGACATGGTGTTCCTCAATCTACCTAAGATAAGACTCGATGAGACAGATCAAAAGGAATATAACACAGAGACTGAAGAAGAATGCAAGTTTTTGTGCTTGAACATGTCTCATCCACAGTGCCAGGCTTATGCATACAACACTTCTAACGACTATCGTGTCGTTACTTCTTCTTCGTGTAGGATTTGGACAAATGATTTAGCTACTCTTCAAGTAGACCAAGAGGCTGGTGGTGATCTTGCTGTTCTTGTCAAGAGTTCAGATATAGGGCGAACAGTGGCATGTAATCCTTGCGGAATATATACAATTCCTTATCCGCTAAGTACAGGGCCAAACTGTGGAGACCCGGAATACTATAAGTTCAATTGCAGCTACTCAACAGGGCAGGGGTTTCCCTCATTCAACATGCATGCCAACAATTGA 1515 0.4238 MTINEQNETMITNMRTLTFLLLLFLLYDFLQAHSAQDTLITGQSIPRTRKVLASAGEKFVLGFFSPLENPGQSYLGIWYNTNRTYPGKTVMVWVANRDNPVLGSNGGGVFQIAQDGNLLVTNESGSTFWSSKLDKSSSNNRTVKLTDSGNLVLFQHHDDDGNGTSYIIWQSFQYPTDTFLPGMEIDRAMELTSWRYDGGGGGRESFFTFKMSQTGNNRFRIMDSQNQLHWENDGLNSNDLSPDVLNYLTNFTDAENRPSKYVNTNTSKSLYYSYQDTRIVMNSTGELQFWKWEESEWIMQWKHPSSMCKIHNFCGNFSSCNVDDWMPCKCLPGFRLASEYETQSYEMGMKFPGCVRKSESHGDNRDMVFLNLPKIRLDETDQKEYNTETEEECKFLCLNMSHPQCQAYAYNTSNDYRVVTSSSCRIWTNDLATLQVDQEAGGDLAVLVKSSDIGRTVACNPCGIYTIPYPLSTGPNCGDPEYYKFNCSYSTGQGFPSFNMHANN* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1136 504 ProSiteProfiles Bulb-type lectin domain profile. 36 166 IPR001480 -
Amo08g1136 504 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 190 IPR036426 -
Amo08g1136 504 Gene3D - 30 173 IPR036426 -
Amo08g1136 504 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 27 469 - -
Amo08g1136 504 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 469 - -
Amo08g1136 504 ProSiteProfiles PAN/Apple domain profile. 354 451 IPR003609 -
Amo08g1136 504 SMART blect_4 43 175 IPR001480 -
Amo08g1136 504 Pfam D-mannose binding lectin 91 188 IPR001480 -
Amo08g1136 504 CDD B_lectin 52 175 IPR001480 -
Amo08g1136 504 Pfam S-locus glycoprotein domain 260 336 IPR000858 GO:0048544
Amo08g1136 504 Pfam PAN domain 372 433 IPR003609 -
Amo08g1136 504 Gene3D Hepatocyte Growth Factor 367 445 - -
Amo08g1136 504 SMART ntp_6 364 448 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1136 Amo-Chr8 18924459 18926477 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1136 - - ahf:112705270 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0909 18 13440892 13445377 Amo08g1136 08 18924459 18926477 hybridization
Amo08g1136 08 18924459 18926477 Amo13g1920 13 28900383 28904956 PCT