Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1134 ATGAAGAGCTGCGAGTTGTGCAAGGTTCCGGCCAGGACCTTCTGCGAGTCCGACCAGGCCAGTCTCTGTTGGGACTGCGACGCCAACGTTCATGGTGCTAACTTCCTCGTCGCCAGGCACACAAGAACCCTCCTCTGTCACGCCTGCCAGTCACCCACGCCCTGGAAGGCTTCCGGCGACAGGTTAGGCAACACCGTCTCGCTCTGTGAGATGTGCGCCGGCGGCAACAAGGTCTCCGCGGAGGAGAGCGAAGGAGGCAATGACGACGACATAGACACCGAGGACGACGATCTTGAAGACGAAGAAGAGGAAGAGGATGATGACGATGACGAGGTTCCCGCCGACGAGGAGGAGGAAGAAGACGGGGACAACCAGGTGGTGCCTTGGTCCTCTACGGCGCCGCCCCCGCCGGCTCCGAGTTCATCCAGCAGCGAAGAGTCGGTCAGCCGCCGGTGCAACCACGCAGACGAAGAGGATTTTTCTGAGGCAGTTCCCTTAAAACGGCATCGTCACGATGTGGATCATGATGATTTTCTGGAGGGTTCGAAAGCTTGGAGATATAAACGGAGATACGGGGGGAGTGGAGAGAGGAGGTTGGTTGGTTAG 606 0.5875 MKSCELCKVPARTFCESDQASLCWDCDANVHGANFLVARHTRTLLCHACQSPTPWKASGDRLGNTVSLCEMCAGGNKVSAEESEGGNDDDIDTEDDDLEDEEEEEDDDDDEVPADEEEEEDGDNQVVPWSSTAPPPPAPSSSSSEESVSRRCNHADEEDFSEAVPLKRHRHDVDHDDFLEGSKAWRYKRRYGGSGERRLVG* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1134 201 MobiDBLite consensus disorder prediction 85 124 - -
Amo08g1134 201 CDD Bbox1_BBX-like 4 45 - -
Amo08g1134 201 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Amo08g1134 201 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 182 - -
Amo08g1134 201 SMART bboxneu5 1 45 IPR000315 GO:0008270
Amo08g1134 201 MobiDBLite consensus disorder prediction 78 181 - -
Amo08g1134 201 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Amo08g1134 201 MobiDBLite consensus disorder prediction 149 181 - -
Amo08g1134 201 PANTHER - 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1134 Amo-Chr8 18904929 18906658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1134 2 138 C2C2-CO-like Transcription Factor Family AT4G27310 41.860 2.65e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo08g1134 zf-B_box 2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1134 - - gmx:100801024 190.66