Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1133 ATGATGAACCCATGCTTCTGCTCCTTCTTCTTCTCCTACTACTACTTCTTCTCATTGACTCCTTCCCTTGCCCTTGCACCACTCACCGCCATCTCCGCAACTCAATCTCTCTCCGGTGACCAGACCCTTCTCTCCAAAGGTGGAATCTTCGAACTAGGTTTCTTCAAGCCAGGTAACTCCTCTAACTACTACATAGGCATGTGGTACAAGAAGCTCTCTCTACAAACAATTGTTTGGGTTGCCAATAGAGACCACCCTGTATCTGATAAGAGCACTGCCAACTTCACTATTTCAAAGGGTAACTTAGTACTCTTTGATGAGTCTCAAACTCAAGTTTGGTCAACCAACATAACTACCTCTCCTGCTTCACCTTCTGCACTAGTAGTATCTATTCTTCTCGATAATGGGAACCTCATAATTAGTAATAACCCTAATGCATCATCATCAGAAGAAGCCATTTGGCAGAGTTTTGATCACCCAACAGATACATGGCTTCCCGGAGGGAAAATCAAACTTGATAACAAAACAAAGAAGCCTCAGTATCTAACTTCATGGAAGAACAATGAAGATCCTGCAACTGGTCTCTTCTCTTTGGAATTGGACCCTAAAGGGAGCACTTCATACCTTATTCTTTGGAACAAGACTGAACAGTATTGGACGAGTGGCCCTTGGAATGGTCATATCTTCAGCTTGGTCCCTGAGATGAGGTTGAATTACATCTACAATTTCAGCTTCATTTCGAACGAAAACGAGAGCTATTTCACCTATACAGTCTATAATTCTTCCATTATATCGCGCTTCGTGATGGATGTTTCGGGCCAGATCAAGCAACTGTCATGGCTGGATAGCATTCAGCAATGGAATTTGTTTTGGTCTCAGCCGAGAACGCAGTGTCAAGTTTATGCTTTCTGTGGTGCCTTCGGGAGCTGCACCGAGAACTCAATGCCATACTGCAATTGCTTGCAAGGTTTTGAGCCAAAATCAAAGTCTGATTGGGATCTTCAGGATCAATCAGGAGGGTGTGTCAGGAAAACAAATTTGCAATGTGAGAGTTCAAAATCATCTAATGGTGAAAAGGACAGGTTTCTACCAATCCTAAACATGGCATCACCGAAACATTCAGAAGAAGTAGGGGCAGGAACTAAAGAGGAATGTGAATCAACATGCTTGAACAATTGTTCCTGCACTGCTTATGCATATGGAAGTAGCCAATGTTCAATTTGGAATGGAGATCTCTTGAATCTGCAGCAGCTATCTTCAGATGATAGCAGTGGACAAATCTTGTACCTCAAGCTTGCAGCTTCTGAGTTTCATGATGCTAAGAGCAACAAGGTGCCACTTATTGGTGGCATTGTGGGAGGTGTTGTTGCCATAGGGATTCTCCTCGGCCTTGTTCTGTTCTTGGTGATTCGGCGAAGGAAGAGAATGGTTGGGAAGGGAAAGCTAGTGGAGGGTTCACTGGTGGCATTTGGGTACAGAGACCTACAAAACGCAACCAAGAATTTCTCAGAGAAATTGGGAGGAGGGGGTTTCGGTTCTGTGTTCAAAGGCTATTTGGGTGATTCAAGTGTTGTGGCAGTGAAGAAGCTTGAGAGCATTAGCCAAGGAGAGAAGCAGTTTAGAACAGAAGTTAGTACTATTGGGACAGTTCAACATGTTAATCTTGTTCGGTTAAGAGGTTTCTGCTCCGAAGGCTCCAAAAAGTTATTGGTTTATGATTACATGCCAAATGGCTCCTTAGAATTCCATCTCTTTCAGAACAAGAACTCCAAGATCATGGACTGGAAAATGAGGTACCAAATCGCGCTCGGCACGGCCAGGGGATTGACTTATCTTCATGATAGTTGTAGAGACTGCATCATACACTGTGACGTCAAGCCTGAGAACATCCTTCTAGATGCTCAATTTTGTCCCAAAGTCGCAGATTTCGGCCTTGCAAAGCTTGTTGGAAGAGAATTCAGCAGGGTCCTTACAACAATGAGAGGAACAAGAGGCTACCTTGCCCCTGAATGGATCTCTGGGGTGGCTATAACCCCCAAAGCAGATGTCTACAGCTACGGAATGATGCTTTTCGAGTTTGTATCCGGCAAGAGGAACTCTGAGCCTTGTGATGATGGCAAAGTGAAGTTCTTCCCTACATGGGCTGCTACTCTTGTAACTGAAGGCAGCAATGTCCTTAGCCTCTTGGACCCTAGGTTGGAGGCGAATGCGGATGTTGAAGAGGTCACTAGAATAATCAAAGTAGCTTCTTGGTGTGTCCAAGATGATGAATCTCATAGGCCAACCATGGCTCAGGTTGTTCAGATACTTGAAGGGATCTTGGATGTCGCTTCGCCTCCCATTCCAAGAACCCTTCAAGTGTTTCTGGACAACCAGGAGGACATAGTTTTCTTCACCGATTCCAACTCTTCCAACCAGAGCTCACAGGTGAAGAGCACCACCACTGTCTCAACAACATCATCTCAACCCAAAAGTAACATCTCTTCAGCAAGCTCCAAGTCCTTAGGAGGAAATTAA 2517 0.4454 MMNPCFCSFFFSYYYFFSLTPSLALAPLTAISATQSLSGDQTLLSKGGIFELGFFKPGNSSNYYIGMWYKKLSLQTIVWVANRDHPVSDKSTANFTISKGNLVLFDESQTQVWSTNITTSPASPSALVVSILLDNGNLIISNNPNASSSEEAIWQSFDHPTDTWLPGGKIKLDNKTKKPQYLTSWKNNEDPATGLFSLELDPKGSTSYLILWNKTEQYWTSGPWNGHIFSLVPEMRLNYIYNFSFISNENESYFTYTVYNSSIISRFVMDVSGQIKQLSWLDSIQQWNLFWSQPRTQCQVYAFCGAFGSCTENSMPYCNCLQGFEPKSKSDWDLQDQSGGCVRKTNLQCESSKSSNGEKDRFLPILNMASPKHSEEVGAGTKEECESTCLNNCSCTAYAYGSSQCSIWNGDLLNLQQLSSDDSSGQILYLKLAASEFHDAKSNKVPLIGGIVGGVVAIGILLGLVLFLVIRRRKRMVGKGKLVEGSLVAFGYRDLQNATKNFSEKLGGGGFGSVFKGYLGDSSVVAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGSKKLLVYDYMPNGSLEFHLFQNKNSKIMDWKMRYQIALGTARGLTYLHDSCRDCIIHCDVKPENILLDAQFCPKVADFGLAKLVGREFSRVLTTMRGTRGYLAPEWISGVAITPKADVYSYGMMLFEFVSGKRNSEPCDDGKVKFFPTWAATLVTEGSNVLSLLDPRLEANADVEEVTRIIKVASWCVQDDESHRPTMAQVVQILEGILDVASPPIPRTLQVFLDNQEDIVFFTDSNSSNQSSQVKSTTTVSTTSSQPKSNISSASSKSLGGN* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1133 838 Gene3D - 28 158 IPR036426 -
Amo08g1133 838 CDD TM_EGFR-like 444 475 - -
Amo08g1133 838 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Amo08g1133 838 SMART blect_4 34 160 IPR001480 -
Amo08g1133 838 Pfam D-mannose binding lectin 76 186 IPR001480 -
Amo08g1133 838 ProSiteProfiles Bulb-type lectin domain profile. 28 153 IPR001480 -
Amo08g1133 838 Gene3D Phosphorylase Kinase; domain 1 467 574 - -
Amo08g1133 838 PIRSF SRK 1 823 IPR024171 GO:0004674
Amo08g1133 838 SUPERFAMILY Protein kinase-like (PK-like) 488 804 IPR011009 -
Amo08g1133 838 ProSiteProfiles PAN/Apple domain profile. 349 433 IPR003609 -
Amo08g1133 838 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 225 IPR036426 -
Amo08g1133 838 ProSiteProfiles Protein kinase domain profile. 500 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1133 838 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 801 - -
Amo08g1133 838 Pfam PAN-like domain 357 414 IPR003609 -
Amo08g1133 838 SMART serkin_6 500 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1133 838 MobiDBLite consensus disorder prediction 800 838 - -
Amo08g1133 838 CDD PAN_AP_plant 345 433 - -
Amo08g1133 838 Pfam Protein kinase domain 503 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1133 838 Gene3D Transferase(Phosphotransferase) domain 1 575 779 - -
Amo08g1133 838 SMART ntp_6 357 432 IPR003609 -
Amo08g1133 838 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 14 801 - -
Amo08g1133 838 CDD STKc_IRAK 506 773 - -
Amo08g1133 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Amo08g1133 838 CDD B_lectin 34 160 IPR001480 -
Amo08g1133 838 ProSitePatterns Protein kinases ATP-binding region signature. 506 529 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1133 Amo-Chr8 18889160 18892692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1133 456 780 Receptor kinase-like Gene Family AT5G20050 41.389 3.64e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo08g1133 Pkinase 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1133 - - gmx:100782119 1206.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1133 08 18889160 18892692 Amo13g1950 13 29303229 29305953 PCT
Amo08g1133 08 18889160 18892692 Amo03g0696 03 12865683 12868256 PCT
Amo13g1950 13 29303229 29305953 Amo08g1133 08 18889160 18892692 PCT
Amo03g0696 03 12865683 12868256 Amo08g1133 08 18889160 18892692 PCT