Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1124 ATGGAGTTTGAGCTTGAGAACCCCTTTGATGAGAACTACCATAACCTTCCCTTTGAAGCTGTCTCCTCCCTCTTCCACATTGAATCTGAACACATCCCTCCCTCCAATTACTTCCACACTCTCAAGGCCACTGATTTTGATATCTCTCTTAGAACACATCTCATTTCCTTCATATCACAGTTGTCCTGCACCTTTGATCCGGTTCTGCCTTACCTTGCCACCAACTATCTAGATCGCTATCTTGCCAACCAACCCATATTGCAACCAAAGCCATGGACCAACAAGCTTCTTGCAATCTCTTGCTTCTCTCTAGCTGCTAAGATGTTAAAGATAGAGTATTCTCCCACTGATGTTCAGGTTCTTGTGAACAATCATGGTGATGGTGGTGTCATATTTGAGGCACAAACAATACAAAGAATGGAGGCCATTGTGTTGGGGACACTACAATGGCGYATGCGTTCCATAACACCATTCTCATTCATCCCTTTCTTCATCAACTTGTTGGGCATCAATGACCCTTCATTCAACCAGGTACTCAAAGATAGGGCCTCCCAGATCATATTGAAGTCACAAACAGAGATAAAGGTTTTAGAATTCAAGCCATCTGTAATTGCAGCATCAGCTCTACTGTCTGCTTCACATGAGTTGTTTCCCTTTCAGTATCCATGCTTCTTTCGAGCAATATCTGATTCTTCATATGTAAATAAAGAGAGCATGTTGCAGTGCTATAATGTGATACAGGAAATGGGTAGAGAGGAGTACGAATCATCTGTGTTGAATGTGAATTCAAGTTCAGACACACCGGTTAATGTATTGGATGAACATTTTCTGAGCTTGGAAGAAAGTGAAAAAACCAACATTGCTCCCACCACACACAATAAGGACCTCAAAAGAAGATCAAAGTTCACTGCTTATGGTAACAACAACAACAACAACCACTCCCTCCATTCTCACCATCAATGCTAG 966 0.4193 MEFELENPFDENYHNLPFEAVSSLFHIESEHIPPSNYFHTLKATDFDISLRTHLISFISQLSCTFDPVLPYLATNYLDRYLANQPILQPKPWTNKLLAISCFSLAAKMLKIEYSPTDVQVLVNNHGDGGVIFEAQTIQRMEAIVLGTLQWRMRSITPFSFIPFFINLLGINDPSFNQVLKDRASQIILKSQTEIKVLEFKPSVIAASALLSASHELFPFQYPCFFRAISDSSYVNKESMLQCYNVIQEMGREEYESSVLNVNSSSDTPVNVLDEHFLSLEESEKTNIAPTTHNKDLKRRSKFTAYGNNNNNNHSLHSHHQC* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1124 321 CDD CYCLIN 50 145 IPR013763 -
Amo08g1124 321 Gene3D - 34 153 - -
Amo08g1124 321 Pfam Cyclin, C-terminal domain 155 257 IPR004367 -
Amo08g1124 321 SMART cyclin_7 52 146 IPR013763 -
Amo08g1124 321 Pfam Cyclin, N-terminal domain 22 152 IPR006671 -
Amo08g1124 321 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 11 304 - -
Amo08g1124 321 SUPERFAMILY Cyclin-like 137 251 IPR036915 -
Amo08g1124 321 PANTHER CYCLINS 11 304 IPR039361 -
Amo08g1124 321 Gene3D - 23 244 - -
Amo08g1124 321 SUPERFAMILY Cyclin-like 19 152 IPR036915 -
Amo08g1124 321 SMART Cyclin_C_2 155 271 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1124 Amo-Chr8 18769236 18771612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1124 1 301 Core Cell Cycle Gene Families AT4G03270 42.812 8.96e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1124 K18812 - gmx:100799951 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1124 08 18769236 18771612 Amo03g0669 03 12330292 12331020 PCT
Amo03g0669 03 12330292 12331020 Amo08g1124 08 18769236 18771612 PCT