Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1119 ATGGCACAAATGGAAAATTCTAGCGATAATATTAATAAGCTAGTTGAGCATCAATTTCAAGTTGGTGTAGTCGCATCCATTGAAAATGATGCCAAAATCAATAATACGTCTTTTCCCCTCACATTCCTTGACATACCTTTAGCTGGTCCAATCTATGTCAAACGCTTATTCTTCTACAAATACCCTTTTTCCACCAACCATTTTTACCAAACTACCCTTCCATATCTCAAGCGTTCTCTCTCACTCACCCTCCAAAGTTTCTTCCCTCTTGCCGGTAACCTCCTTTGTCCACCACCGCCACACAAGCCCTTCATTCAATGCACAAATGAAGACTCCGTGGCCTTCACCGTCGTCGAGTCTTCCTTGGATTTCAACCTTTTAGCAAGCAACAACCCGAAAAGCATCAATGATTTGCGTACCTTGGCTCCCAATCTGGTAGGCAAAGCCATGCATCATGATCATGATAGTGGTGACGATGACACACTCGTGTTTCCAATTTTGGCCTTGAAAGCCACGGTTTTCGCAAACCGTGGCGTTTGCATTGCCATAAATTATTGTCACGTCATGGACGATAGGTCTTGTGGTCAATTCATGAAATCTTGGTCTTCTCTTTGTGGAACAATAATAAGAAACGGTGAAGAAGTTGAATCAACGCTTCTAGACAAGTACCTACCACCACCGCCATGCTTCGATAGGGGAGTGTTGAAGGATCCGAAGGGACTGGAGTCCATTTTCTTGAATGATTATTTCGGCGAGAGGCAAAGTTTCAAGGACAAAGTTGTTAGTCAAAGTCAAACAGGAAGTCTTCGAGCAGAAGAGGAAGAGGACTACGTTAAAGCGACAATCGTATTTGGTAGAAAAGAGATGGAGGGAATGAAAAGGTTTGCGCTGAATGAGTTAAAGAAAAGCAATAGAAGCGAAGCGCCGCAATATTTATCATCTTTCGTTGTGACATGTGCTTTTTTATGGAGTACCCTGGTTAAAACAAAACACAGAGATGAAGAAGAGAATGATGCGAAAGAGGATTGTATTCGTTTCGCAGCTGATGTTAGAGAGCGTCTAGAGTATCCGATTGCGGAGAATTACTTCGGAAACTGCATAACGAGATGCCATGCAAGGCTGAAGAGGAAGGAGCTGAAAGGGGAAGGTGGGTTTGTGAATGCGGCAAGGGTTATTGACAAGGCTGTAAACGACATGAAGGAGGAGCCGTTTAGGGGTGCGGAGAATTGGAAGTCAACGTTTATCAAGTTGTTTGTGTTGGGGAATAGTGGGTTGCTTGTGGCTGGGTCCCACAAGTTCGGTGTGTATGACACTGATTTTGGGTTTGGAAGGCCTGTTAAAGTGGAAATGCTGCATTCCTTCAGAGTTATGTCAATTGCGGACACTGGTGACACTGAAAAAGGAGGGATTGAGTTTGGGATGGTGTTTACAAAAGCTGAATTTCAGTGTTTTCAACATAAGCTTCAACAAGGACTTCAAGTCTTTGCTTAA 1491 0.4339 MAQMENSSDNINKLVEHQFQVGVVASIENDAKINNTSFPLTFLDIPLAGPIYVKRLFFYKYPFSTNHFYQTTLPYLKRSLSLTLQSFFPLAGNLLCPPPPHKPFIQCTNEDSVAFTVVESSLDFNLLASNNPKSINDLRTLAPNLVGKAMHHDHDSGDDDTLVFPILALKATVFANRGVCIAINYCHVMDDRSCGQFMKSWSSLCGTIIRNGEEVESTLLDKYLPPPPCFDRGVLKDPKGLESIFLNDYFGERQSFKDKVVSQSQTGSLRAEEEEDYVKATIVFGRKEMEGMKRFALNELKKSNRSEAPQYLSSFVVTCAFLWSTLVKTKHRDEEENDAKEDCIRFAADVRERLEYPIAENYFGNCITRCHARLKRKELKGEGGFVNAARVIDKAVNDMKEEPFRGAENWKSTFIKLFVLGNSGLLVAGSHKFGVYDTDFGFGRPVKVEMLHSFRVMSIADTGDTEKGGIEFGMVFTKAEFQCFQHKLQQGLQVFA* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1119 496 Gene3D - 24 261 IPR023213 -
Amo08g1119 496 Gene3D - 273 496 IPR023213 -
Amo08g1119 496 PANTHER - 31 495 - -
Amo08g1119 496 Pfam Transferase family 27 487 - -
Amo08g1119 496 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 31 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1119 Amo-Chr8 18734291 18736163 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1119 52 446 Monolignol Biosynthesis Gene Families AT5G48930 21.845 4.77e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1119 - - adu:107461989 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0937 18 14130552 14132397 Amo08g1119 08 18734291 18736163 hybridization