Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1116 ATGGAAAATCATCATAGCAAGCATAAGCTTGTGGAACAAACACAAGTTGGTCTTCCAAAAGCATACCATGATAATGATGATCCAAAAATCAAATCCCTCCCCCTTACATTCCTTGACCTACCTTTTACAGGTCCAATTTACGTTAGACGCCAATTTTTCTATAACTTCCCTTTTTCCACCAACCATTTTTACCAAAATACCCTCCCAACCCTCAAACTCTCTCTGTCTCTTACTCTACAACGTTTCTTCCCTCTAGCCGGGAACCTCCTATGTCCTCCACCACCCCACAAGCCCTTCATTCAATGTACCAATGAAGACACCGTCACCTTCACCATCATCGAGTCGGCTTCGAATTTCGATCATATTTCAAGCAATGACCCCAAAAGTGTCAAAGATTTGGATCACTTGGTTCCAACATTAATGGACAAGGCCACACATGACAAGAGTGATGACACGATCGTGTCACCACTTGTGGCCTTGCAGGTCACGGTTTTTTCAAACAGTGGCCTTTGCATCGCCATCACCTATTGTCACGTGATGGACGATAGGTGTTGTGGCCATTTTATGAAATTTTGGTCTTCTCTTTGTGGAATAATAAATTTGGAAGAAATTATTGACTCAACACTCTTAAAGAAGCACTATTCATTACTACCCTGTTTTGATAGGGAAATATTGAAGGATCCTAATGAGCTCGAGGCCGTTTTGTTGAAAGACTATTTTAACGAGAGGACTTTATGGAAGGACAAACTCGTAGCTCAAAGTCAAAATGGTGAATCAATATTGGAAGAGGACTATGTTAAAACAACAATTGTGTTTGGTAGAGAAGGCATTGAAGCAATGAAAAGGTTTGCGATGAACAAATTGAAGAAAAGCAACGGATACAAAGCGCCGCAATATCTATCAACCTTTATGGTGATATGTGGTTTTGTATGGAGTAGTTTAATTAAAACTACAAGACATGACGATAACAATGAAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAGCATTTTCATTTTCCAGCTGATTGTAGGAATAACAATCTACTCGGATATCCAATTCCAATTACTTACTTTGGGAATTGCATAACACAGTGCCAAACAAAGCTTAAGAGGATGGAACTTAAAGGAGAAGACGGTTTTGTGAATGCGGTTAAGGTAATAGAAAAGGGTATAAACGACATGAAGAGTTCGCCGTTTCRGGGTGCGGAAAATTGGAAGGCATTGTTCATGAAGTTGTTTGTGTTGGGGAATAGTGCGTTTCATGTGATGGCTTCGCACAAGTTGGGTGTGTATGAGACTGACTTTGGATTTGGAAGGCCTAAGAAAGTTGAAATGGTGCATTCATCAAAGGCTATATCTCTTGCTGAAAGTGGACACGTGGAGGGAGGGGTTGAGGTTGGATTGGTGTTAAAGAGGGTCCATTATCAAAGATTTGTTCATTGCAACACGCAGGGGGCGTGTTGCCTAAACTACGTGGGAGGCGTGAAAGCGACGTGGCTGGATGAGGTTGTGCCAACAAGGCAGCACGCAGGGGGTGTGCTTAGTCAGCACGCAGGGGGCGTGTTGACGTGGCGAGACCTGGATGGCTCAGACGGGGAAGCACGCAGGGGGCGTGATGAGTCAGCACGTGGGGGGCGTGCTGATGTGGCAAACATGCATTGGTCCACGTATGCAGCACGTGGGGGACGTGCTGAATGA 1698 0.437 MENHHSKHKLVEQTQVGLPKAYHDNDDPKIKSLPLTFLDLPFTGPIYVRRQFFYNFPFSTNHFYQNTLPTLKLSLSLTLQRFFPLAGNLLCPPPPHKPFIQCTNEDTVTFTIIESASNFDHISSNDPKSVKDLDHLVPTLMDKATHDKSDDTIVSPLVALQVTVFSNSGLCIAITYCHVMDDRCCGHFMKFWSSLCGIINLEEIIDSTLLKKHYSLLPCFDREILKDPNELEAVLLKDYFNERTLWKDKLVAQSQNGESILEEDYVKTTIVFGREGIEAMKRFAMNKLKKSNGYKAPQYLSTFMVICGFVWSSLIKTTRHDDNNEGGEEEEEEEEHFHFPADCRNNNLLGYPIPITYFGNCITQCQTKLKRMELKGEDGFVNAVKVIEKGINDMKSSPFXGAENWKALFMKLFVLGNSAFHVMASHKLGVYETDFGFGRPKKVEMVHSSKAISLAESGHVEGGVEVGLVLKRVHYQRFVHCNTQGACCLNYVGGVKATWLDEVVPTRQHAGGVLSQHAGGVLTWRDLDGSDGEARRGRDESARGGRADVANMHWSTYAARGGRAE* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1116 565 Pfam Transferase family 31 480 - -
Amo08g1116 565 PANTHER - 5 486 - -
Amo08g1116 565 Gene3D - 9 250 IPR023213 -
Amo08g1116 565 Gene3D - 262 485 IPR023213 -
Amo08g1116 565 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1116 Amo-Chr8 18712382 18714812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1116 52 440 Monolignol Biosynthesis Gene Families AT5G48930 21.642 2.03e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1116 - - adu:107461989 545.428