Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1113 ATGGCTCCTGAGACCGACAACTATGGTGAGGTGAAGATAATAGAAAATTGTCAAGTTGCTCCACCACAAGGCTCTCTTCCCTCAACCACACTCCCCTTCACTTTCTTCGATATTCAATGGTTCCTATGCCACCCCGTGAAGCGCATCTTCTTCTATGACTTCCCTTACCCTACCAACCACTTCCTTCAATCATCACTCCCTCCTCTCAAACACTCTCTTTCCCTCACTCTTCAACACTTTTTCCCTTTCGCCTCCAAACTCATCTGGCCTCCACCACCCCACGAACCTTTCATGCGCTATCACCAAGGTAGCGACTCAGTTGCTTTCACGGTTGCGGAGTCCAAAGCTGATTTCAATCTTCTTGTATCTGATTCACCACAAAATGCAAGAGATTGGCACCCTTTTGTTCCTTCTTTGCCTCCACAAGATACCTTAGAGAATGGCACTCGTGTGATCCCTYTAATGGCGATTCAAGTAACCATGATACCGAATTCTGGATTCGCTATTTGTCTCACTTTCAACCACCTTGTTGCGGATGGCAAGTCTCTTCATCATTTCATMAAGTTTTGGGCCACACTTTGCAAGGAGATAGTAACAAAAGGAGGTAATMACTTAGGCTCCTTTCTTGAAGGGTCYAATAGTAATTTAACCCTACCTTCCCATGATAGAAACATGGTTAARGACCCAAAAGGGCTGAAGCAAGTTTTCTTGGAAGAGCTGAAAAAATCTTATTTTGAGAGCTTGGAATTCCGAGGGCTTGTGAAAGATGTTTCTACCAACAAGGCACGTGGTACGCTCGTGGTGACACGTGACCAAGTTGACAAATTAAAAAAATGGGTGTCGCTTAAATATAGCGACACCCATGGTGATAACTCTGAGTCATTGCAACACATTTCAACCTTTGTTGTCACAAGCTCTTTGGTTTGGGTTAGTATAATGGAAACAGAAGAACAATGCAATAATAATAAGTATGATGAAAATTGCCATTTGGTGTTTCTAGCTGATTGCCGTGGCCATGTTGAATTTTGTGTACCTCAAAATTACTTTGGAAATTGTCTAGACTCTGGGTTTGTGACATTCAAAAGGGGTGACATATTAGGAGAAAATGGGATTGTTAGGGTGGCAAGTGCAATTGAGAGTGAATTAGGCAATATGATAATATATGTAATGAGACCACTATTATTATTGTTCTGA 1194 0.4196 MAPETDNYGEVKIIENCQVAPPQGSLPSTTLPFTFFDIQWFLCHPVKRIFFYDFPYPTNHFLQSSLPPLKHSLSLTLQHFFPFASKLIWPPPPHEPFMRYHQGSDSVAFTVAESKADFNLLVSDSPQNARDWHPFVPSLPPQDTLENGTRVIPLMAIQVTMIPNSGFAICLTFNHLVADGKSLHHFIKFWATLCKEIVTKGGNXLGSFLEGSNSNLTLPSHDRNMVKDPKGLKQVFLEELKKSYFESLEFRGLVKDVSTNKARGTLVVTRDQVDKLKKWVSLKYSDTHGDNSESLQHISTFVVTSSLVWVSIMETEEQCNNNKYDENCHLVFLADCRGHVEFCVPQNYFGNCLDSGFVTFKRGDILGENGIVRVASAIESELGNMIIYVMRPLLLLF* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1113 397 PANTHER - 11 385 - -
Amo08g1113 397 Pfam Transferase family 11 386 - -
Amo08g1113 397 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 11 385 - -
Amo08g1113 397 Gene3D - 10 248 IPR023213 -
Amo08g1113 397 Gene3D - 258 389 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1113 Amo-Chr8 18669140 18670690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1113 49 368 Monolignol Biosynthesis Gene Families AT5G48930 22.388 1.18e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1113 - - ahf:112707065 813.142