Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1105 GGTGTCCAAGCTGCTTACTGGGAGATGCTTGATGAAGGACAAATTTCTCAAATGACAGCTAATATTCTGATGTTATCTGTGGAGGAGGCAATAGATTTGGCTTCACATGAGCCTCTATGTGACTGGAAAGGCTTAAAATCTAATGTTCACTTTCCAAATTACTACAAGTTTCTTCAGTTTAGTATGCTTCTACCAAAATTAGTTACATACTTCACTGTGGAAAGGTTGGAATCTGCTTGTAATATTTGTGCTGCGTTTCTTCGTGCACACAGAGTTGCTCGACAACAATTACATGACTTCATAGGAGTTGTGAAAACAAGGCAAGCCACATATGTAGTGCTAAATCACTTAATTGAATATGTTCAAGACCTTGAGAAGGCTGGGATTTTGGAGGAGAAAGAGATGTTGCATCTGCATGATGCTGTCCAGACTGATTTAAAGAAATTATTCAGAAATCCTCCTTTGGTGAAGCTTCCTAAAATAACTAGTATGCATCCTATGTTGGGCGCTCTGCCTTCTCCAATTCGTGAATCACTTATAAGTGGTACTAGGGAAGTGCAACGATTAGAATCTTCTCTGGTTAGATTTTCAAGCAGTGAAACTGTTATTGCAGGTTAG 618 0.3916 GVQAAYWEMLDEGQISQMTANILMLSVEEAIDLASHEPLCDWKGLKSNVHFPNYYKFLQFSMLLPKLVTYFTVERLESACNICAAFLRAHRVARQQLHDFIGVVKTRQATYVVLNHLIEYVQDLEKAGILEEKEMLHLHDAVQTDLKKLFRNPPLVKLPKITSMHPMLGALPSPIRESLISGTREVQRLESSLVRFSSSETVIAG* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1105 205 PANTHER - 1 102 - -
Amo08g1105 205 PANTHER - 102 186 - -
Amo08g1105 205 PANTHER SODIUM/HYDROGEN EXCHANGER 1 102 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo08g1105 205 PANTHER SODIUM/HYDROGEN EXCHANGER 102 186 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1105 Amo-Chr8 18556092 18556943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1105 1 191 Antiporters AT2G01980 54.148 1.27e-72 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1105 - - ahf:112792471 344.739