Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1092 ATGACGGTGGTAGACATCCTGTTCCGGGTGGACTCCATATGCAGCAAATACGACAAATACGACCTCGACAAGCAGCGGGAACTCAATGCCTACGGTGATGACGCCTTCGCTCGCCTCTACGCCACCGTTGATTCCACCATCGAAGCCGCCCTCAAGAAATCGGATGCTGCCTTGGCGGAGAACAACAGAGCAGCTGCTGCTGCTATGAATGCGGAGGTTCGACGCGCCAAGGGTAGACTCATGGACGAGATTCCCAAGCTCCGCAAATTGGCCAAGAAGAAGGTTAAAGGTTTGACAGACGAAGATTTAGCGATCCGTGAGGATCTTGTATTGGCATTGCCAGAAAGAATTCAAGCAATTCCCGATGGTATTACCACTGTCAATCAAACAGGAGGAGGATGGACATCGCAGCCCAACATCAAGTTTGATTCAGACGTGCATCACGGCACTGAGTATTTCGACCAAACTGAAGAATCCAGTCAGTTCAGAAATGAGTATGAAATGCGCAGGATCAAACAGGATGAAGGTCTTGACTTCATATCGGAGGGATTGGATACTTTGAAAAATCTAGCTCATGACATGAGTGAGAGAGGTGGGTCACAATGGACACACTTAAATACCAAGTCTTTCCTTAGCCAGAACCTTTCCAAACTACACTCTCACAGATCAACTGAGGTGATATGA 684 0.481 MTVVDILFRVDSICSKYDKYDLDKQRELNAYGDDAFARLYATVDSTIEAALKKSDAALAENNRAAAAAMNAEVRRAKGRLMDEIPKLRKLAKKKVKGLTDEDLAIREDLVLALPERIQAIPDGITTVNQTGGGWTSQPNIKFDSDVHHGTEYFDQTEESSQFRNEYEMRRIKQDEGLDFISEGLDTLKNLAHDMSERGGSQWTHLNTKSFLSQNLSKLHSHRSTEVI* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1092 227 PANTHER SYNTAXIN-72 1 197 - -
Amo08g1092 227 PANTHER SYNTAXIN 1 197 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1092 Amo-Chr8 18436648 18439746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1092 1 196 SNARE and Associated Proteins AT3G09740 62.687 1.63e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1092 K08506 - gmx:100817729 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0455 18 6002703 6004600 Amo08g1092 08 18436648 18439746 hybridization