Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1079 ATGAGCTCCTCAAACAAGAACACCATTAAGAATGGTGACACCCAGAACTCCCTTCATCTGGAATCGGGGTCACCAGCGCAGCCAAGTCCCATTTGGAAGCTGGTGGCGGTAGCCTCCATCGCTGCCGGTATCCAGTTTGGCTGGGCTCTACAACTCTCCCTCCTAACACCTTACAGTCAGCTTCTCGGAGTGCCTCACCAATGGTCCTCTTTCATCTGGCTCTGCGGCCCCATTTCCGGCATGGTTGTCCAGCCAATAGTTGGTTACTATAGCGACCGATGTACCTCCAAACTCGGCCGCCGCCGTCCTTTCATTCTTGCCGGCGCCGCTGCTGTCGCCATAGCTGTTTTTCTCATTGGCTTTGCCGCCGATATTGGCCATGCCTTTGGGGACAACCTGAACAAGAAAACCCGCCCACGCGCCGTAGCCATATTTGTGATCGGATTCTGGATCTTGGACGTGGCCAACAACATGCTCCAGGGACCCTGTCGAGCGTTCCTGGGTGACCTTGCCGCCGGTGATGAACGGAAAACGAGGCTGGCAAACGCGTTCTTCTCGTTCTTCATGGCCGTGGGAAGCGTACTCGGTTACGGTGCGGGGTCCATTGACAGCCTCCACAAAGTGTTTCCATTCACGCAGACAAAAGCGTGCGATGTGTTCTGCGCAGACTTGAAAAGTTGCTTCTTCTTCTCGATCCTCCTACTGCTGTCGTTGACAGGTGTAGCTTTGTTCTACGTGCCGGATAAACAAGTATTACGTGAGAAGTCACCTGTGGGAGAAGAAGATGAGAGATCGGCAGCAGTTGTATGCTTCGGAGAAATGTTGGGGGCGCTAAAAGGGCTGAAGAAGCCCATGTTGCTACTAATGGCGGTTACGGCAATAAACTGGTCGGCGTGGTTTGCATATTTCTTGTACAACACTGACTGGATGGGTAAGGAGGTATATGGTGGAGAGGTTGGAAATCAAGCGTATAAAGACGGCGTCCAAAAGGGAGCTTTGGGTCTTTTGATAAATTCCGTGGTTTTGGGTGTTATGTCTTTGGGTGTGGAACCCATTGGACGTGCGGTTGGTGGTGCTAAGAATCTCTGGGGAATTGTTAATTTTGTCCTTGCGGCTGGCTTGGCCATGACTGTATATATCAGCAAGGTCGCTATGCACCAGCGTCATCTTAATCCCCACTACATTGGTCATCCCTCCACTGGCGTTCAGGCTGGAGCCTTGTCCTTTTTTGCTGTTCTAGGCATTCCTCTTGCGATAACATACAGTGTTCCGTTTGCATTAGCATCCATCTATTCAAGTGAAACTGGCGCAGGACAAGGTTTATCTTTGGGAGTTCTTAATCTTGCCATTGTGGTTCCGCAGATGATAGTGGCAGCAATTAGCGGACCATGGGACAAATTATTTGGAGGTGGCAATTTGCCGGCGTTCGTGGCAGGTGCGGTGGCAGCCGCCGTGAGTGGTATAATGGCAATTTTCATGCTACCTTCTACAAAGCAATCGGAAGCGGCTAAAGCTGCTCTCCCCATTGGTGGTTTCCATTAG 1542 0.5136 MSSSNKNTIKNGDTQNSLHLESGSPAQPSPIWKLVAVASIAAGIQFGWALQLSLLTPYSQLLGVPHQWSSFIWLCGPISGMVVQPIVGYYSDRCTSKLGRRRPFILAGAAAVAIAVFLIGFAADIGHAFGDNLNKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDERKTRLANAFFSFFMAVGSVLGYGAGSIDSLHKVFPFTQTKACDVFCADLKSCFFFSILLLLSLTGVALFYVPDKQVLREKSPVGEEDERSAAVVCFGEMLGALKGLKKPMLLLMAVTAINWSAWFAYFLYNTDWMGKEVYGGEVGNQAYKDGVQKGALGLLINSVVLGVMSLGVEPIGRAVGGAKNLWGIVNFVLAAGLAMTVYISKVAMHQRHLNPHYIGHPSTGVQAGALSFFAVLGIPLAITYSVPFALASIYSSETGAGQGLSLGVLNLAIVVPQMIVAAISGPWDKLFGGGNLPAFVAGAVAAAVSGIMAIFMLPSTKQSEAAKAALPIGGFH* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1079 513 MobiDBLite consensus disorder prediction 1 24 - -
Amo08g1079 513 PANTHER SUGAR TRANSPORTER 15 501 - -
Amo08g1079 513 SUPERFAMILY MFS general substrate transporter 34 500 IPR036259 -
Amo08g1079 513 CDD MFS_SLC45_SUC 34 492 - -
Amo08g1079 513 Gene3D MFS general substrate transporter like domains 27 503 IPR036259 -
Amo08g1079 513 MobiDBLite consensus disorder prediction 1 26 - -
Amo08g1079 513 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 15 501 - -
Amo08g1079 513 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 499 IPR005989 GO:0005887|GO:0008515|GO:0015770
Amo08g1079 513 Pfam MFS/sugar transport protein 46 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1079 Amo-Chr8 18188948 18191504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1079 15 513 Sucrose Transporter Gene Family AT1G71890 62.992 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1079 K15378 - gmx:100784153 687.567