Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1077 ATGTTTCTCGATAAAATGGAGAAGTTCCTCGACAACTTGACGCCGATGGATCTGATGCGATCGGAGAAGATGACCTTCGTCCAGCTCATCATCCCCGCCGAGTCCGCGCACCGAGCCATCTCCTACCTCGGCGAACTCGGACTCCTCCAATTCCGCGACTTAAATGCTGATAAAAGCCCTTTCCAAAGAACGTTTGTTAATCAGGTAAAGCGATGTGCGGAAATGTCACGGAAGCTACGATTCTTCAAGGATCAAATCAATAAAGCTGGCATAATGTCTTCTTCTCATACTGCATTGCAACCAGAGATTGACTTGGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAATTCCAACAGTGACAAACTTCGGCAATCATATAATGAACTCCTCGAATTCAAGATTGCATGTGGTTTTCTTGTTTCAAGTCATGGCCGTGCTATTCCTGACGAGAGAGAACTACAAGAGAATGTATACTCAAATGACTTTGTTGAAACAACATCTTTGCTTGAACAGACCTGGACCATCAAATCCTCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGCTACTTCGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACCAGCTGACGACCAAATCATGGATCCTGTTTCAGCTGAAATGATTGAGAAAACAGTGTTCGTCGTGTTTTTCTCTGGGGAGCAGGCAAGAACTAAGATTCTGAAAATTTGTGAGGCATTTGGGGCAAATTGTTATCCTGTTTCGTCGCGCCTTACTGACTTGGAGGCAACTTTGGATGCGGGGTTGAGGCACCGCAATAAGGCTCTAGCTTCTGTAGGGGAACATCTATCAGACTGGATGAACATGGTAAGAAGAGAGAAGGCCGTGTATGATACACTGAACATGTTAAATTTTGATGTCACAAAAAAGTGTCTTGTTGGAGAGGGATGGTGCCCTATATTTGCAAAAACACAGGAGGCATTGCAACGGGCAACTTTCGATAGCAGTTCACAAGTAGGCATAATCTGCCATCCAATGGATGCAGTGGAATCACCACCTACATATTTTAGGACCAACAGTTTCACAAGTCCATATCAGGAGATTGTTGATGCATATGGTGTTGCGAGATACCAAGAAGCAAATCCTGCTGTTTACACAACTATTATATTCCCCTTCCTATTTGCTGTGATGTTTGGGGATTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTGATTCTTATAGCGCGCGAAAGCAAGCTCAGTACCCAGAAGCTTGGAAGTTTTATGGAGATGCTATTTGGTGGACGCTATGTACTTCTTTTGATGTCACTATTCTCAATCTATTGTGGATTAATCTACAATGAATTCTTTTCTGTTCCGTTTCACATATTTGGTGAGTCAGCTTACAGATGCCGAGATAATACATGCAGGGATGCACATACTATTGGCTTGGTCAAAGTCCGAGATCCATATCCATTTGGTGTGGATCCCAAGTGGCGTGGAAGTCGTTCAGAGTTGGCTTTTCTGAACTCTATGAAGATGAAGATGTCCATTCTGCTTGGTGTGGTGCATATGAACTTGGGAATTATATTAAGTTATTTTAATGCTCGGTTTTTTGGGAACTCACTGGATATAAGGTGTTTTATTTGGGTATCTTCCCTCCTCATTGTTGTTAAGTGGTGTACTGGTTCTCAGGCGGACCTTTATCATGTAATGATATACATGTTTTTGAGCCCCACAGATAATCTTGGTGATAATGAGCTGTTCTGGGGTCAAAGGCCACTTCAAATTGTATTATTGCTTTTGGCACTGATTGCGGCTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGATTCATACTGAGAGATTTCAAGGTCGTAGTTATGGTATGCTTAATACCTCTGAGATGGATCTTGAGGAGCCAGATTCTGCCAGGCAACATCATCATGAAGAATTCAATTTCAGTGAGGTTTTTGTTCACCAAATGATCCACGCCATTGAGTTTATTCTAGGTTCAGTTTCAAATACAGCTTCGTATCTTCGACTTTGGGCACTTAGCTTGGCTCACTCCGAACTTTCTACTGTTTTCTATGAGAAAGTTCTGCTTCTTGCTTGGGGGTATGACAATCTTATCATTCGGTTACTGGGGCTTGCCGTGTTTGCCTTTGCAACTGCCTTTATACTGCTTATGATGGAGACTCTTAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTCGAATTTCAAAACAAATTCTACCATGGTGATGGCTACAAATTCAAGCCTTTTTCCTTTGCAGCCTTAACAGATGACGATGAATGA 2370 0.4232 MFLDKMEKFLDNLTPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGIMSSSHTALQPEIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIACGFLVSSHGRAIPDERELQENVYSNDFVETTSLLEQTWTIKSSGLRFISGIICKSKLLRFERMLFRATRGNMLFNQAPADDQIMDPVSAEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVSSRLTDLEATLDAGLRHRNKALASVGEHLSDWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQEALQRATFDSSSQVGIICHPMDAVESPPTYFRTNSFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALILIARESKLSTQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGESAYRCRDNTCRDAHTIGLVKVRDPYPFGVDPKWRGSRSELAFLNSMKMKMSILLGVVHMNLGIILSYFNARFFGNSLDIRCFIWVSSLLIVVKWCTGSQADLYHVMIYMFLSPTDNLGDNELFWGQRPLQIVLLLLALIAAPWMLFPKPFILKKIHTERFQGRSYGMLNTSEMDLEEPDSARQHHHEEFNFSEVFVHQMIHAIEFILGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLLGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFAALTDDDE* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1077 789 PANTHER VACUOLAR PROTON ATPASE A1 10 789 - -
Amo08g1077 789 Pfam V-type ATPase 116kDa subunit family 42 781 IPR002490 GO:0033179|GO:0046961|GO:1902600
Amo08g1077 789 Coils Coil 105 132 - -
Amo08g1077 789 PIRSF ATP6V0A1 14 789 IPR026028 GO:0000220|GO:0046961
Amo08g1077 789 PANTHER VACUOLAR PROTON ATPASES 10 789 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1077 Amo-Chr8 18150495 18157872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1077 6 782 Primary Pumps ATPases(2) AT2G28520 76.687 0.0 1243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1077 K02154 - gmx:100776037 1374.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0437 18 5775578 5783949 Amo08g1077 08 18150495 18157872 hybridization