Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1047 ATGGTTCTTAGAAAGGGATTGCTCATCGTTAACCACCAGGAGGGTTCTAACTGGGAAACATCGTTAAGTATGGAAAACGCTCGCACCATCATAGCCAAATGGGACCCACTTCCCAACGGCAGCGAAAACAAAGACGCAACTCCTCTCTTCACTAACACGCGCCAGGAAGCCAAACGGTACCTTAACGCCGTTTCAAATCTACATTCCGCTATGCAACACCTCCTCACACTGGATTCTTCCTCGGACCGGCTCGTCGAGGCTTGTTCCCTGATGCAAGTCGCCATGAACAGGCTCGAGAGAGAGTTATATCGTGTATCAGCTGAGATTAGGGACCATGTTGACGATGATAATATTCGCCATGCTGCTGCCAAGGAGGATTTGAAGGCAATCGTGGAGTGTATGTTCTTCGCTGGATATGGCAAAGAGTGCGTCCAGATTTACACCAAGGTCAGAAAGTCCAATGTCACTGAGGCACTGCAGAATCTCGGAGTGGAAAAGCCTAGGCTCTCTAAGATGAAGAAGATGCAATGGGAGATGTTCGATTTTAAGATCAAGACCTGGCTCAACGCCGTCAAATTCGCCGTCGGAGCTCTGTTTCCCGGCGAGAGGAGTCTCATTAACCAAATCTTTCCCTCTTCGGAGAACACGACCGTAGTCGAGTCCTGCTTCGCGGAGATTTGCAAAGACGGTGCCGAAATGTTGTTTCTGTTCCCTGAAATCATAGCAAAGTGCGAGAAAACGCCGGAGAAAATGTTCCGACTACTCGATCTCTACGAAGCACTCTCTCAAAATTGGCCTAAAATCAAGGACATATTCTCATACGAATCAACCTCAAGCGTAAGGTTACAAGTCGGAGTTTCACATATGAAAATCGGCGAGGCCGTTAGAGCAACGTTATCGGCCTTCGAATCGGCGATTACMAAGGAGTCKTCAAAGACGCCGGTCCCCAGCGGCAGGATCCACCCGCTCACTCGCTACGRCATGAACTACATCTCATTCCTAGCCGATTACAGCGACGCGCTCACCAACATACTCATCGATTCGCCAAAGACTCCCATGCCGGAGTCCTACTTCCGGACACCGAAGTTCGCGGCGAAAACTCCAGCGCCTCCGGAGCTGGCGGAGCGGCTGGCGTGGGAGATTCTTCTGCTGCTCTGCAAGATCGACGGAAAAGCAGAGCTCTACAAGAACGTGGCGCTGGGTTACCTGTTTCTTGCGAACAACATGCAATACGTGGTCACAAAGGCGCGGAACWCGAAACTAGGTTCCATCCTGGGCGACGATTGGCTCGCGAGTCACGATCAAAAGGTGAAGGAATACGCATCCAAGTACGTGAACATGGCGTGGAGRATGGTGGAGATGTCTCTGCCGGAGAATCCAAAAGCGGCGATGCAACCGGCGGAAGCTTCCGCCAAGTTCCATATCTTCAATATGGCGTTCCAGGAAGCGTGCCAGATGCAGTCCACGTGGATCGCACCTGACCTGAAACTGCGGGATGATATCCAGAAATCGGTWGTTTCGAAGSTGGTGCCTAAGTACCGGGATTTCTACGAGACGAATTGGGTCGGGTCGGATTCGGTTATAGCGTTCTCACCCGATGATTTGCAGAATCATATTTCTTTTATTTTGCATGATGTTGAAGATCCGGGCAGCATTACTACCCATTTTTCTTCRTTTCTTCGATAG 1686 0.5024 MVLRKGLLIVNHQEGSNWETSLSMENARTIIAKWDPLPNGSENKDATPLFTNTRQEAKRYLNAVSNLHSAMQHLLTLDSSSDRLVEACSLMQVAMNRLERELYRVSAEIRDHVDDDNIRHAAAKEDLKAIVECMFFAGYGKECVQIYTKVRKSNVTEALQNLGVEKPRLSKMKKMQWEMFDFKIKTWLNAVKFAVGALFPGERSLINQIFPSSENTTVVESCFAEICKDGAEMLFLFPEIIAKCEKTPEKMFRLLDLYEALSQNWPKIKDIFSYESTSSVRLQVGVSHMKIGEAVRATLSAFESAITKESSKTPVPSGRIHPLTRYXMNYISFLADYSDALTNILIDSPKTPMPESYFRTPKFAAKTPAPPELAERLAWEILLLLCKIDGKAELYKNVALGYLFLANNMQYVVTKARNXKLGSILGDDWLASHDQKVKEYASKYVNMAWRMVEMSLPENPKAAMQPAEASAKFHIFNMAFQEACQMQSTWIAPDLKLRDDIQKSVVSKXVPKYRDFYETNWVGSDSVIAFSPDDLQNHISFILHDVEDPGSITTHFSSFLR* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1047 561 Coils Coil 95 115 - -
Amo08g1047 561 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 23 118 - -
Amo08g1047 561 Pfam Exo70 exocyst complex subunit 186 540 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo08g1047 561 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 118 IPR004140 GO:0000145|GO:0006887
Amo08g1047 561 PANTHER EXOCYST COMPLEX PROTEIN EXO70 122 549 IPR004140 GO:0000145|GO:0006887
Amo08g1047 561 Gene3D Exocyst complex component Exo70 41 546 - -
Amo08g1047 561 SUPERFAMILY Cullin repeat-like 48 540 IPR016159 -
Amo08g1047 561 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 122 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1047 Amo-Chr8 17768295 17770258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1047 24 540 EXO70 exocyst subunit family AT5G59730 42.932 9.65e-143 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1047 K07195 - adu:107461556 1105.12