Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0967 ATGCTCACGAGAAGAAAAATCCTCAATTTATTCTCAACCCAATTCGCTTCTCACCAATTCAATGCAGTTTCGAAGTTATCACGAGTTCCTTCGCACCCTTATTCTGAAATCCACAAAACCCTAAACCCCTTTAGGGTTTTTCTTTTGTGCGCATGGAATTCGACGCAAGCATCGAAATTTCCCGAATACGAGATGCCATCGGTGACGTGGGGTGTGATTCAAGGTCGCAAGGAGAAGCTGGTATCGCGGGTCATCGTATTCGACTTCCTCAGGGGTTTGGGAATTGTCCCTAACGAGTTGCAGGACCTTGAGCTACCTTCGACAGTTGAAGTCATGAGGGAGCGCGTGGAGTTCCTCCAGAAACTAGGGCTAACAATTGATGACATCAACGATTACCCTTTGATGTTGGGATGCAGTGTGAGGAAGAACATAATTCCTGTTTTGGGGTACTTGGAAAAAATTGGGATTTCAAGATCCAAACTTGGGGGATTCATTAAGAGCTACCCGCAGGTATTGCATGCTAGTGTGATTGTTGAGCTTGTCCCTGTTGTGAAGTTCCTTAGGGGACTTGATGTGGAGAGGGAGGATATTGGGTATGTGTTGCAGAAGTACCCTGAACTTCTAGGGTTCAAGCTTGAGGGTACTATGAGTACATCAGTGGCTTATCTTGTTAGTATTGGGGTTAATCCTAGGGATATTGGTCCCATGGTGACTCAGTATCCTTATTTTTTGGGGATGAGAGTTGGGACTGTGATCAAGCCTTTTATTGATTACTTAGTCTCTTTGGGACTGCCAAAGAAGATTTTGGCTAAGATGTTGGAGAAGAGGAGCTATTTGCTTGGATATGATCTTGAAGAGACTATCAAGCCAAATGTGGATTGTTTGATTAGCTTTGGGATAGGGAGGGAGTGTTTGCCTTCGGTTATTGCACAGTATCCTCAGATTCTTGGATTGCCCCTCAAAGCCAAGTTGTCTTCGCAGCAGTACTTCTTCAGTTTAAAGCTTAAGATTGATCCTGAAGGTTTTGCGCGAGTCGTGGAGAAGATGCCGCAGGTGGTTAGCCTTCACCAAAACGTGATCATGAAGCCGGTCGAGTTCCTCCTCGGAAGGGCTATAGCACTGCATGATGTGGCTAGCATGGTGGTCAAGTGTCCGCAGTTAGTAGCACTGAGAGTGGAGCTCATGAAGAACAGTTTTTACTTCTTTAAGAGTGAGATGGGAAGACCACTGAAAGAGCTTGTAGAGTTCCCTGAATACTTTACTTACAGTCTGGAGTCTAGGGTCAAACCAAGATACCAAAGGCTAAAGAGCAAGGGGATAAGGTGTTCATTGAATTGGATGCTGAATTGTAGTGACCAGAGATTTGAAGAGAGGTTGCAGGGTAATTATATTGAGACTGAAAGTACAGGTCCGACATTTTTAATGGGTGGGAAATTGAACCTGCCAGGTAATGCAATTCTTTCAGATGAGGAAGAGGAGAGTGATGATGAAGTACTATACCGAAGAACTGTTTCTTTATAG 1521 0.4444 MLTRRKILNLFSTQFASHQFNAVSKLSRVPSHPYSEIHKTLNPFRVFLLCAWNSTQASKFPEYEMPSVTWGVIQGRKEKLVSRVIVFDFLRGLGIVPNELQDLELPSTVEVMRERVEFLQKLGLTIDDINDYPLMLGCSVRKNIIPVLGYLEKIGISRSKLGGFIKSYPQVLHASVIVELVPVVKFLRGLDVEREDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTVIKPFIDYLVSLGLPKKILAKMLEKRSYLLGYDLEETIKPNVDCLISFGIGRECLPSVIAQYPQILGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGRAIALHDVASMVVKCPQLVALRVELMKNSFYFFKSEMGRPLKELVEFPEYFTYSLESRVKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQGNYIETESTGPTFLMGGKLNLPGNAILSDEEEESDDEVLYRRTVSL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0967 506 Gene3D Transcription termination factor 3, mitochondrial 253 466 IPR038538 -
Amo08g0967 506 Gene3D Transcription termination factor 3, mitochondrial 112 252 IPR038538 -
Amo08g0967 506 PANTHER EXPRESSED PROTEIN 51 489 - -
Amo08g0967 506 PANTHER CGI-12 PROTEIN-RELATED 51 489 IPR003690 GO:0003690|GO:0006355
Amo08g0967 506 SMART mt_12 378 409 IPR003690 GO:0003690|GO:0006355
Amo08g0967 506 SMART mt_12 343 373 IPR003690 GO:0003690|GO:0006355
Amo08g0967 506 SMART mt_12 306 338 IPR003690 GO:0003690|GO:0006355
Amo08g0967 506 SMART mt_12 162 193 IPR003690 GO:0003690|GO:0006355
Amo08g0967 506 SMART mt_12 234 265 IPR003690 GO:0003690|GO:0006355
Amo08g0967 506 SMART mt_12 198 229 IPR003690 GO:0003690|GO:0006355
Amo08g0967 506 SMART mt_12 410 441 IPR003690 GO:0003690|GO:0006355
Amo08g0967 506 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Amo08g0967 506 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Amo08g0967 506 Pfam mTERF 148 456 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0967 Amo-Chr8 16536998 16541532 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo08g0967 mTERF 9.8e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0967 K15032 - gmx:100809590 829.706