Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0950 ATGCCAACAAACTCGCAGCAACAGTTTCACGCTTTCTACGAAGGATGGATCCAACGCAAACAGACTCTCCTCGACGAGCTTCTCACACTTTCCGACGCTCCCGACTCCCAACACAAACACATCGCTCTCATTGAATCCGTTCTCTCCCACTACCAACAATACTTCGAGCACAAAACACGCCTCCAAAACGACGACGTTTTGCTTCTCTTCTCTCCCACCTGGCTCTCCACCTACGAGCGAGCACTTCTGGCGGAGACTAGGACCGGGGAGAGGGAGCTTTCTGCTGCAATGGCGGCGTTTCAGGAGAGCGTGGCTAGTCCGCGCGTGTTGCAACGCGTTAGGAGAGTCGGGAGGTTGTTGGATGGGGAGATTGATGAGCTTGATGAGTCTATGGGGGGGATGAGGAACGCCGTGGGAGAGCTTTTTCAGAGAGCGGATGAGTTGAGGGTGGCTACGGTTAGGAAGGTCGTGGCGGTTCTTTCTCCGCCGAAGACGGTTAGGTTTCTTGCCGCGGCCTTGGGGTTTCAGCTACGTGTCAGGCGGTGGGGGATGGAAAGGGACCAGTCCCGTTGA 573 0.5585 MPTNSQQQFHAFYEGWIQRKQTLLDELLTLSDAPDSQHKHIALIESVLSHYQQYFEHKTRLQNDDVLLLFSPTWLSTYERALLAETRTGERELSAAMAAFQESVASPRVLQRVRRVGRLLDGEIDELDESMGGMRNAVGELFQRADELRVATVRKVVAVLSPPKTVRFLAAALGFQLRVRRWGMERDQSR* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0950 190 PANTHER TRANSCRIPTION FACTOR HBP-1B 3 83 - -
Amo08g0950 190 PANTHER TRANSCRIPTION FACTOR HBP-1B 84 189 - -
Amo08g0950 190 PANTHER - 84 189 - -
Amo08g0950 190 PANTHER - 3 83 - -
Amo08g0950 190 ProSiteProfiles DOG1 domain profile. 6 189 IPR025422 GO:0006351|GO:0043565
Amo08g0950 190 Pfam Seed dormancy control 25 83 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0950 Amo-Chr8 16290950 16291621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0950 9 180 bZIP Transcription Factor Family AT3G12250 21.801 1.35e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0950 - - mdm:103429852 181.03