Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0945 ATGAACGCCACACACAAAATGTCCAAGATACCCCTCCGCATTCGCAAGTTCTCTCTACATTTCTTCTTCTTGCTTACCCTCACACTGTCCTCCGATGTCATTTCACAAACCACCGAACAAACCACCCTTCTCACCTTCAAACGCCAACTAGGCGATCCGCCGTCACTACAATCATGGCAACCGTCGCCGTCGTCGTCTCCGTGCGGGTGGCAGGAAGTCCGGTGCGCCGGTGGCACAGTCACGGAGCTTCTCCTCGCCAATAAGGATATCACCGTGAAGAACCTCCCGGCGCCGACGATATGCGACGGCCTCAGGAACCTCACGAAGCTCGACCTCTCCAACAACTCTATCTCCGGTGAGTTTCCGACCTTACTCTACAATTGCTCCAATCTCAACTACCTCGACCTCTCACAGAACTACCTGGCCGGAAAAATTCCCGATGACGTCGACCGCCTCAGAACCCTAACGTACCTCAACCTTGGCGGCAACAGCTTCATCGGCGACGTTCCTCCGGCCATCGGAAACCTTCCGGAACTCAGAACCCTCCACCTCTTCCAGAACAACTTCAACGGAACGTTAGCAAAAGAAATCGGAAACCTCTCCAATCTGGAAATCCTTGGTCTTGCCTTTAATTACCGTCTTGCCCCTGCGCCGATCCCGGTCGACTTTGGGAACCTGACGAACCTGAAGTTCATGTGGCTGAGACAGTGCAACTTGACCGGAGAGATTCCCCAGAATTTCGCGAAACTCGAGAATCTTGAAAAGTTGGATTTGTCAATGAACAACTTAACAGGGAGAATTCCTACTAGCTTGTTTTCTTTAAGAAATTTGACGTTTTTGTATCTGTACCACAATAAGTTGTTTGGTGAGATACCAAATTCGGTGCAAGCTTTGAACCTGGCTGGGGTTGATTTGAGCATGAACAATTTGACAGGTTCTATACCAAAAGATTTTGGAAAGTTGAACAACTTGACGGCTTTGCTGCTGTATTATAACCAGTTGAGTGGTGAGGTTCCAAATGGTTTAGGATTATTACCAAAGCTTAGTAATTTTAGTGTTTTTGGGAACAAACTGAATGGAACTCTGCCTCCGGAATTCGGCAGGCATTCGAGGCTGGTGGGGTTTGAGGTTGACAGCAATCAGTTGAGTGGAGGGCTGCCGGAGCATTTGTGCGACGGCGGTGCTCTGAGGGGTGTGGTGGCTTTCTCCAATGATCTGAGTGGTGACTTGCCTCAATGGCTTGGGAATTGTAGTTCTCTTGTCACAGTTCAGCTTCACAATAACAGGTTCTCAGGGGAGGTTCCTTTGAGTTTGTGGACTTCGAGGAGCCTTGAGAGCTTGATGCTGAGCAACAACTCGTTTTCCGGTCAGATTCCAAGAGAATTGTCCCGGAGTATGACAAGGTTGGAGATCAGAGACAACAAGTTTTCTGGTCCAATATTGCTTGGTGTTTCTTCTGTTGTGAATCTTGTGGTTTTTAAGGCAGGAAACAACATGCTTTCCGGTGAGATTCCAAGAGAATTGACCGGTATTTCTCAGATGACAACTCTCATGCTTGATGGGAATCAACTTTCCGGTACGCTTCCATCCGACATAATTTCATGGAAGTCGTTGAACACTTTAACCCTATCAAGAAACAACCTTTCAGGTCAAATCCCACTAGCTATGAGTACTCTTCCTAGTCTGGTTTACTTGGATTTGTCTGAAAATGAGTTGTCTGGTGAAATACCAACTCAGTTAGGCGACTTGAGGTTTGTTTTTCTCAACTTGTCCTATAATAAGCTTTCTGGGAACATACCAGATGAGCTTAACAACCTCGCCTATGAAAGTAGTTTCTTGAACAATCCCAATCTGTGTGCTTATGATCCAAAAGTCAATCTATCTAATTGCTTGACTAAAACCTCATCCCACTCCAGCAATTCATCTAAAAAGTTCTTTGCCTTGATTCTTGGGGTCATCATCATTGTATTGTTAGCCGCTGCCCTCTTGGCATTGTGCAAGCTGACAAAGCAACGGGGTAAAAAGCTGCGTTGTGGCCGTAAGCTTTCAACATGGAGGCTCACTTCATTCCAGAGGCTTGACCTCACAGAAATTAATCTCTTTTCAAGTTTGACAGACAGCAACCTTATTGGAAGTGGAGGCTTTGGAAAAGTTTACCGGATCGCTTCAAATCGCCCAGGTGAGTATGTTGCTGTGAAGCAGATTTGGAGTGACAAGGATGTGGATCACAAGCGGGAGAAAGAGTTTATGGCTGAGGTTGAAATCTTGGGCAACATTAGGCATTCTAATGTAGTGAAACTCTTGTGTTGCTACTCAAGTGAGAACTCAAAGCTTCTTGTATATGAGTACATGGAAAATCATAGCCTTGACAAATGGCTACATGGAAAGAATAAAAAGTCACCAATTGGTTTGAGTACACCCAACAGGACTCATGCAGTGTTGAGTTGGCCAACGAGGTTGAAGATTGCCATTGGAGCTGCACAAGGCCTATGTTACATGCACCATGAGTGCTCACCATCAATCATCCATCGCGATGTTAAGTCTAGCAATATACTATTAAACTCCGAATTCAAGGCTAGTATAGCAGATTTTGGACTCGCCACGATGCTGTTAAAGCCAGGGGAGCTGCACACCATGTCTGCTTTAGCAGGGTCTTTTGGCTACATTCCACCAGAATATGCTTATTGTAGCAAGATCAATGAGAAAGTCGATGTATATAGTTTTGGGGTTGTGCTCCTAGAGCTTGTGACTGGAAGAGAGCCTAAATGTGGAGAAGATGGAAGCAGCCTAGTTGACTGGGCATGGAGGCAATACAGTGAGGGGAAGTGTCTTGCTGATGCCTTAGATGAGGATATCAAAGAAACATGCCACGTGGAAGATATGACTACTGCCTACAAACTAGGGCTCATTTGCACAAGCTCATTACCCTCATCTAGGCCTTCTACAAGGGAGATTTTGCAAGTTCTTCGTCAGTGTTGTCACCCAGGTTCTTCACGTAAGAGAGTGGCAACTGACTTTGACATAACTCCCCTACTTAGTGATGCTAGGTACATAGCCAGTTACAAGGACAGTAATGTTACAAGCGAGAACGAAGAAAGCCGCTTGTATAGTGTGTAA 3117 0.4588 MNATHKMSKIPLRIRKFSLHFFFLLTLTLSSDVISQTTEQTTLLTFKRQLGDPPSLQSWQPSPSSSPCGWQEVRCAGGTVTELLLANKDITVKNLPAPTICDGLRNLTKLDLSNNSISGEFPTLLYNCSNLNYLDLSQNYLAGKIPDDVDRLRTLTYLNLGGNSFIGDVPPAIGNLPELRTLHLFQNNFNGTLAKEIGNLSNLEILGLAFNYRLAPAPIPVDFGNLTNLKFMWLRQCNLTGEIPQNFAKLENLEKLDLSMNNLTGRIPTSLFSLRNLTFLYLYHNKLFGEIPNSVQALNLAGVDLSMNNLTGSIPKDFGKLNNLTALLLYYNQLSGEVPNGLGLLPKLSNFSVFGNKLNGTLPPEFGRHSRLVGFEVDSNQLSGGLPEHLCDGGALRGVVAFSNDLSGDLPQWLGNCSSLVTVQLHNNRFSGEVPLSLWTSRSLESLMLSNNSFSGQIPRELSRSMTRLEIRDNKFSGPILLGVSSVVNLVVFKAGNNMLSGEIPRELTGISQMTTLMLDGNQLSGTLPSDIISWKSLNTLTLSRNNLSGQIPLAMSTLPSLVYLDLSENELSGEIPTQLGDLRFVFLNLSYNKLSGNIPDELNNLAYESSFLNNPNLCAYDPKVNLSNCLTKTSSHSSNSSKKFFALILGVIIIVLLAAALLALCKLTKQRGKKLRCGRKLSTWRLTSFQRLDLTEINLFSSLTDSNLIGSGGFGKVYRIASNRPGEYVAVKQIWSDKDVDHKREKEFMAEVEILGNIRHSNVVKLLCCYSSENSKLLVYEYMENHSLDKWLHGKNKKSPIGLSTPNRTHAVLSWPTRLKIAIGAAQGLCYMHHECSPSIIHRDVKSSNILLNSEFKASIADFGLATMLLKPGELHTMSALAGSFGYIPPEYAYCSKINEKVDVYSFGVVLLELVTGREPKCGEDGSSLVDWAWRQYSEGKCLADALDEDIKETCHVEDMTTAYKLGLICTSSLPSSRPSTREILQVLRQCCHPGSSRKRVATDFDITPLLSDARYIASYKDSNVTSENEESRLYSV* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0945 1038 SUPERFAMILY RNI-like 299 607 - -
Amo08g0945 1038 PRINTS Leucine-rich repeat signature 107 120 - -
Amo08g0945 1038 PRINTS Leucine-rich repeat signature 250 263 - -
Amo08g0945 1038 SUPERFAMILY L domain-like 50 386 - -
Amo08g0945 1038 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 23 1005 - -
Amo08g0945 1038 Gene3D Ribonuclease Inhibitor 34 217 IPR032675 -
Amo08g0945 1038 ProSitePatterns Protein kinases ATP-binding region signature. 710 733 IPR017441 GO:0005524
Amo08g0945 1038 Gene3D Ribonuclease Inhibitor 467 650 IPR032675 -
Amo08g0945 1038 Gene3D Ribonuclease Inhibitor 218 359 IPR032675 -
Amo08g0945 1038 ProSiteProfiles Leucine-rich repeat profile. 106 128 IPR001611 GO:0005515
Amo08g0945 1038 SMART serkin_6 704 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0945 1038 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 23 1005 - -
Amo08g0945 1038 Gene3D Phosphorylase Kinase; domain 1 686 783 - -
Amo08g0945 1038 Gene3D Ribonuclease Inhibitor 360 466 IPR032675 -
Amo08g0945 1038 Pfam Protein kinase domain 706 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0945 1038 SMART LRR_typ_2 176 200 IPR003591 -
Amo08g0945 1038 SMART LRR_typ_2 511 535 IPR003591 -
Amo08g0945 1038 SMART LRR_typ_2 442 465 IPR003591 -
Amo08g0945 1038 SMART LRR_typ_2 250 274 IPR003591 -
Amo08g0945 1038 SMART LRR_typ_2 321 345 IPR003591 -
Amo08g0945 1038 SMART LRR_typ_2 559 583 IPR003591 -
Amo08g0945 1038 SMART LRR_typ_2 104 128 IPR003591 -
Amo08g0945 1038 SUPERFAMILY Protein kinase-like (PK-like) 698 989 IPR011009 -
Amo08g0945 1038 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
Amo08g0945 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Amo08g0945 1038 Gene3D Transferase(Phosphotransferase) domain 1 784 1007 - -
Amo08g0945 1038 Pfam Leucine rich repeat 231 287 IPR001611 GO:0005515
Amo08g0945 1038 Pfam Leucine rich repeat 513 572 IPR001611 GO:0005515
Amo08g0945 1038 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Amo08g0945 1038 ProSiteProfiles Protein kinase domain profile. 704 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0945 Amo-Chr8 16206387 16209669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0945 33 1012 Receptor kinase-like Gene Family AT5G25930 54.323 0.0 1024
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo08g0945 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0945 - K00924 adu:107461025 1936.77