Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0923 ATGGAGGAGATGTCGACTACGGTTGCAGTGCCATTAACAGTAGGTAATTCGGTGTGTGATAAGCCAACCATAGCTACCCACATGGATGTATCTAGACTTAAGCTGATGACTGATACGGGGTTGTTAAGTAATTCTGTAACAGCGGTTTCTACTGAAACGTTTATAGGCTCTAATGAGGATCATAATGGTGGCAATCTTGAGGATGAAGTTGGTAGTACAACAGTCACACCATCAAAAAAGGGAAGTGAAGGAGAAATTCCTCTGGATGATATGATATCCCAGAATAAAAGCACTTTGGTTGGTGGTGATGAAGCTTCAACCCCAGAAATCGAGGAGGATGATACCTTATCATTGGAAGGTGATCCAATTATTGATAGCTCCTGTTCTCTTTCAGCAGCCAGTGAGAACAGTAGTATTTGTGGAGATGAGTTCATCAATTCGGAGGCCAATCCGGATTTAGGAACAAGAAGTTCCGTAGACATAGGAAAGAGCATGTGCGCTGTTGATGCTGTTGCCAGGGCTGCTGATTTAGGGGAGTCCAATTATGAGGCAGATATTATGAGTGAACCCCTTGCTGTAACGGTGAGCCTTGAAGAAGAGGCAGTAGTTGGATCTGTCACAAAGCCTACTACAGTTGTTCTTCATCAGCTACCGCTAGAAAAAGCGGTGGCTGGAACAGGTGGTCGAAGTGTTTTTGAATTGGACTGTACCCCGCTTTGGGGATTTATATCTTTGTGTGGAAAAAGACCCGAGATGGAAGACGCATTTGCAACAGTACCCCGATTCATGAAGATTCCTATTGAAATGCTAATTGGTGATAGGGTAATCGATGGACTGAATAAAAGTTTGAGTCAGCAAACAATTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAACTATTGTCGTGAGCGTATGCATTTGGCGTTGGCAGAGGAAATAGAATTAGTCAAGGAAGGTCTAAGAGTTGGAAGTAGCAAGGATGATTGTCAAGACCAATGGAAAAAAGCTTTCACCAATTGCTTTTTGAAGGTTGATGCTGAAGTTGGGGGAAAAGTTAACAATGAACCTGTTGCACCGGAGACTGTCGGATCAACTGCAGTTGTTGCTGCTATCTGTTCATCTCATATCATTGTTTCAAACTGTGGTGATTCAAGAGCAGTTTTGTGCCGTGGCAAAGAGCCCATGGCTTTATCTGTTGACCATAAACCCAATCGAGATGATGAATACGCAAGAATTGAGGCAGCAGGAGGGAAGGTGATCCAGTGGAATGGTCATCGTGTATTTGGTGTCCTTGCAATGTCACGATCTATCGGTGATAGATATTTGAAGCCATGGATCATTCCGGAGCCGGAAGTTACGTTTCTTCCCCGGACGAAAGACGACGAATGCCTCATTCTGGCGAGTGATGGCCTGTGGGATGTCATGACGAATGAAGAGGTGTGCGACCTAGCTAGGAAGCGAATACTTCTCTGGCACAAGAAAAATGGCCTGACACTGCCACCAGAAAGGGGAGAGGGAGTTGATCCTGCAGCACAAGCGGCCGCAGAGTACCTATCGAGCCGTGCCCTACAGAAGGGAAGCAAAGATAACATCACAGTAATTGTGGTGGACTTAAAAGCTCAAAGAAAATTCAAGAGCAAGACATGA 1662 0.4495 MEEMSTTVAVPLTVGNSVCDKPTIATHMDVSRLKLMTDTGLLSNSVTAVSTETFIGSNEDHNGGNLEDEVGSTTVTPSKKGSEGEIPLDDMISQNKSTLVGGDEASTPEIEEDDTLSLEGDPIIDSSCSLSAASENSSICGDEFINSEANPDLGTRSSVDIGKSMCAVDAVARAADLGESNYEADIMSEPLAVTVSLEEEAVVGSVTKPTTVVLHQLPLEKAVAGTGGRSVFELDCTPLWGFISLCGKRPEMEDAFATVPRFMKIPIEMLIGDRVIDGLNKSLSQQTIHFFGVYDGHGGSQVANYCRERMHLALAEEIELVKEGLRVGSSKDDCQDQWKKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAAICSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRTKDDECLILASDGLWDVMTNEEVCDLARKRILLWHKKNGLTLPPERGEGVDPAAQAAAEYLSSRALQKGSKDNITVIVVDLKAQRKFKSKT* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0923 553 SMART PP2C_4 229 541 IPR001932 -
Amo08g0923 553 Gene3D - 226 553 IPR036457 -
Amo08g0923 553 SUPERFAMILY PP2C-like 236 544 IPR036457 -
Amo08g0923 553 CDD PP2Cc 244 543 IPR001932 -
Amo08g0923 553 PANTHER ALPHABET, ISOFORM E-RELATED 127 553 - -
Amo08g0923 553 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 127 553 - -
Amo08g0923 553 MobiDBLite consensus disorder prediction 55 88 - -
Amo08g0923 553 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
Amo08g0923 553 Pfam Protein phosphatase 2C 272 536 IPR001932 -
Amo08g0923 553 ProSiteProfiles PPM-type phosphatase domain profile. 239 543 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0923 Amo-Chr8 15869944 15872841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0923 1 553 PP2C-type Phosphatase Gene Family AT1G17550 49.027 4.42e-168 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0923 K14497 - gmx:100803321 874.389