Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0922 ATGGAGGATCTCGTGGAAGAAGAGAAGGGAGGAGAGGAGGTGTTAGGTTCGAGCTTGACGATGGAGAAGGTAGCTGCAGCTAAGAAGTTCATAGAGAATCACTATAGGGCTCAGATGAAGAACATCCAAGAGAGGAAGGAGAGGCGTTGGGTTTTAGAAAGACAATTAGCTTCTTCAGATGTGCCAAATGAGGAACGTGTTAACTTAATCAAAGATTTAGAGAGGAAGGAGACTGAATATATGCGATTGAAAAGGCACAAGATTTGTGTTGACGATTTTGAGKATTTGACCATCATTGGAAGGGGGGCCTTTGGAGAGGTTAGACTGTGTCGGGAGAAGAAATCTGGAAACATTTATGCCATGAAAAAGCTGAAGAAATCTGAAATGCTGAAGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTACTAGCTGAAGTTGCTAGTCATTGCATTGTGAAACTTTACTACTCATTTCAGGATGCTGACTACTTGTATTTAATTATGGAGTACCTTCCCGGGGGTGATGTGATGACYCTATTGATGAGGGAAGACACGTTAAGTGAAGATGTTGCCAGATTTTACATTGCACAGAGTGTTCTAGCCATAGAGTCTATTCATAAACACAATTACATTCACAGGGATATTAAACCAGATAACCTTCTCCTGGATAAAAATGGACACATGAAGCTCTCAGATTTTGGCCTCTGTAAGCCTCTTGATTGTACTACCCTGTCTACACTGCATGAAAATCAAACTATGGATGATGAAAATGTGGCAGAGCCCATGGATATTGATGGATGTTTTCCTGATGCGGACAATCGGAGCAGCTGGAGAAGCCCACGTGAACAGCTTCAGCATTGGCAGATGAACAGGAGGAAGTTGGCATTTTCAACAGTGGGGACACCTGATTACATTGCTCCTGAAGTACTTTTGAAGAAYGGATATGGAATGGAATGTGACTGGTGGTCATTAGGAGCAATAATGTATGAAATGCTAGTTGGTTATCCTCCATTTTATGCTGATGACCCAATAACTACATGCAGAAAGATTGTTCATTGGAGAAATCATTTACGATTTCCAGAAGATGCACGCTTGACACTTGAAGCCAAAGACTTAATCTGCAGGCTGCTGTGTGATGTTGATCATAGGTTAGGTACTCAAGGGGCACAGGAAATCAAGGTTCATCCTTGGTTCAAGAARGTGGAGTGGGATAAACTATACCAAATGGAGGCAGCATTCAAACCTCAAGTCAATGGGGAGCTGGATACCCAAAACTTCATGAAGTTTGATGAGGTAGATCCACCAACAGGAGCAAGAACTGGATCTGGATCCTCCCGGAAGATGCTTTTGACTCCCAAAGATCTAAACTTTGTTGGGTATACTTACAAGAACTTTGATGGCCCAAAGATAGGGAATGATAGGTGTGGTTGTTTTTCTCATATTATGCAGCCAAGTAGGTGTATTTACAGCGTTCGGAGGCAACAGAATATGCCTATGCATGAAAAGATCATACCTTAA 1524 0.4219 MEDLVEEEKGGEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWVLERQLASSDVPNEERVNLIKDLERKETEYMRLKRHKICVDDFEXLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDVMTLLMREDTLSEDVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCTTLSTLHENQTMDDENVAEPMDIDGCFPDADNRSSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKNGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLRFPEDARLTLEAKDLICRLLCDVDHRLGTQGAQEIKVHPWFKKVEWDKLYQMEAAFKPQVNGELDTQNFMKFDEVDPPTGARTGSGSSRKMLLTPKDLNFVGYTYKNFDGPKIGNDRCGCFSHIMQPSRCIYSVRRQQNMPMHEKIIP* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0922 507 CDD STKc_NDR_like 91 465 - -
Amo08g0922 507 Gene3D Phosphorylase Kinase; domain 1 83 178 - -
Amo08g0922 507 ProSiteProfiles AGC-kinase C-terminal domain profile. 401 474 IPR000961 GO:0004674|GO:0005524|GO:0006468
Amo08g0922 507 Gene3D Transferase(Phosphotransferase) domain 1 179 417 - -
Amo08g0922 507 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 13 475 - -
Amo08g0922 507 Pfam Protein kinase C terminal domain 419 464 IPR017892 GO:0004674|GO:0005524|GO:0006468
Amo08g0922 507 SUPERFAMILY Protein kinase-like (PK-like) 76 443 IPR011009 -
Amo08g0922 507 ProSiteProfiles Protein kinase domain profile. 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0922 507 SMART pkinase_C_6 401 466 IPR000961 GO:0004674|GO:0005524|GO:0006468
Amo08g0922 507 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Amo08g0922 507 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 475 - -
Amo08g0922 507 SMART serkin_6 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0922 507 Coils Coil 66 86 - -
Amo08g0922 507 Pfam Protein kinase domain 292 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0922 507 Pfam Protein kinase domain 94 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0922 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0922 Amo-Chr8 15853353 15862112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0922 1 471 AGC Kinase Gene Family AT4G33080 83.087 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Amo08g0922 Pkinase 9.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0922 K08790 - gmx:100815717 882.478