Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0911 AGTTCCTCTAACCTAATCCTCTCCTTCTTCTCTTCTCTGTTGTCGTCGTCACAGGTGCCACCGGTGGCGGTAGCGGCAAGAGGAGTTGTCCCTAGACATCATCCACCAAACACGACGTTGGTGGCCGTGGACAAAGATAAGAACAGTTCCTACGCATTTCGTTGGGCGGTTAATCATCTCGACAACCCTCTCGTCCTTGCCGTCCATGTCAAACACAAAGACAACATTTGTAGCCTTCGTAACGATCTCGTTACTGTTTATGAACCCGATGAAGACGATGTAGCCAATGTGTTCGGCAACTTACGTGGACTTTGTAATCGAAAAGCTGTGCAAGTAAAAGAAGCCGTAATCCATGAAAGCGATGTTGTGAGAGGAATTGTGGAATTTGCAAGCAAGAATTTCATACACACTATTGTGGTTGGTGCACCAGCCAACAAGGGTGCTTTSTCAAGAATATTGAGAGGGCACCAAACTGATGTGCCAACAGCATTGCTTAAATCAGCTCCAGATTTCAGTTATGTATACGTGATTTCCAAATGGAAAATTGTGTCGGTTCGATCTGCAACACGTGCCATCCAACATACCCTTGCCCCACCCAGAACTCCACCGCGGCTATGGCAATCACCACCCTCTACTCCTACTCCTTCCAGACAACCGCAATCAAAATCACAACCTGTTATGCACCACTATCCACATAGTGAACCAGACATGGGAGGAACAAGAGGAATCTCGTTCCGTGATAAGCCAATGAGTGCAGGAAATTCTCCATTAATGGGTAATATCTTTGAAGACACACCTCCTCATCTAAGACATTTCTCAATGGATGACTGTAGAGAAATATCAATGGATCACAACCAAACTACTAACTTCAGCTTCTCATCAGAATTCTCATCAACCTCAATCTCTTCTTCTACTAGAGATATTGATGCAGAAATTAGAAGATTGAAGCAGGAACTGCAGCAAACTATAGACTTGTACAGCACAGCTTGCAAACAAGCCATCTCAGCCAAGAAAGAGGCTGAAATGATGCGGCATTTGAAAATGGAAGGGGAGAGAAGAGTTGAGGCGATTAGGATGTCTCAAGAGGCAGCTCTTGCCATTGCAGAAAGGGAGAAGGCAAGGGCCACGGCAGCKTGGGAYATGGCYGAGGATGCGAAGAAGAGGGCTGAACTGGAAYCACAGAGAAGAAGGGATGCAGAGTTGAAGGCGGCYAAAGAGGCAGAGGAGAAGGAGATGGCACTAACTGCTTTGGCTCACACCGATATGCGATGCAGYAGATACACCATGGAGGAGATTGAAGCAGCTACAGAGAAGTTCAACCCTTCAAGAAAAATTGGAGAAGGTGGATATGGTTCTGTCTATAAAGGTGATCTTGAAAATACCCCTGTTGCAATTAAGGTCTTAAATCCTGAAGCTGCTCAAGGAAGGAAACAGTTCCAACAAGAGGTTGAGGTACTAAGCTGCATTAGACATCCTAATATGGTTCTGCTCCTTGGTGCTTGTCCTGAATCTGGTTGCTTGGTGTATGAATACATGGACAATGGTACCTTAGAAGATAGATTGTTCCGGAAAGATAATTCACCACCTATGCCATGGAGGCTGCGGTTTAATATAGCTGCTGACATTGCAACTGCTCTCCTTTTCTTACACCAGGCGAAGCCYGAGCCGATTGTTCATCGTGATCTCAAACCAGCTAACATTCTTTTGGACAGGAATTATGTCACCAAAATRGCAGACATCGGTCTGGCAAGATTGGTTCCTCAATCTGTAGTGGACAATGTCACACAATATTACATGACCTCGGCTGCTGGAACATTCTGTTACATTGATCCTGAGTACCAACAAACTGGAATTTTGACCCCAAAATCAGATGTATATTCTTTGGGAGTAGTACTATTGCAAATAATCACAGCCAAACCTGCTATGGGACTTTCTCACCATGTTAGTAGGGCAATTGCAAAGGAAAAATTTGAAGATATGCTTGATCCTATGGTGTTTGATTGGCCAGTTGAGAAGGCTCTAGAATTTGCCAACTTAGCATTGGCCTGTTGTGAGCTCAGAAAGAAGGACAGGCCGAATCTCGCAACCGTTGTGTTGCCGGAACTTAATCGGTTAAGAGAATTTGGAAGATAG 2133 0.4468 SSSNLILSFFSSLLSSSQVPPVAVAARGVVPRHHPPNTTLVAVDKDKNSSYAFRWAVNHLDNPLVLAVHVKHKDNICSLRNDLVTVYEPDEDDVANVFGNLRGLCNRKAVQVKEAVIHESDVVRGIVEFASKNFIHTIVVGAPANKGAXSRILRGHQTDVPTALLKSAPDFSYVYVISKWKIVSVRSATRAIQHTLAPPRTPPRLWQSPPSTPTPSRQPQSKSQPVMHHYPHSEPDMGGTRGISFRDKPMSAGNSPLMGNIFEDTPPHLRHFSMDDCREISMDHNQTTNFSFSSEFSSTSISSSTRDIDAEIRRLKQELQQTIDLYSTACKQAISAKKEAEMMRHLKMEGERRVEAIRMSQEAALAIAEREKARATAAWDMAEDAKKRAELEXQRRRDAELKAAKEAEEKEMALTALAHTDMRCSRYTMEEIEAATEKFNPSRKIGEGGYGSVYKGDLENTPVAIKVLNPEAAQGRKQFQQEVEVLSCIRHPNMVLLLGACPESGCLVYEYMDNGTLEDRLFRKDNSPPMPWRLRFNIAADIATALLFLHQAKPEPIVHRDLKPANILLDRNYVTKXADIGLARLVPQSVVDNVTQYYMTSAAGTFCYIDPEYQQTGILTPKSDVYSLGVVLLQIITAKPAMGLSHHVSRAIAKEKFEDMLDPMVFDWPVEKALEFANLALACCELRKKDRPNLATVVLPELNRLREFGR* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0911 710 Gene3D Phosphorylase Kinase; domain 1 417 511 - -
Amo08g0911 710 MobiDBLite consensus disorder prediction 202 216 - -
Amo08g0911 710 MobiDBLite consensus disorder prediction 194 262 - -
Amo08g0911 710 SMART serkin_6 439 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0911 710 ProSitePatterns Protein kinases ATP-binding region signature. 445 466 IPR017441 GO:0005524
Amo08g0911 710 Gene3D HUPs 26 167 IPR014729 -
Amo08g0911 710 Coils Coil 394 411 - -
Amo08g0911 710 SUPERFAMILY Protein kinase-like (PK-like) 422 698 IPR011009 -
Amo08g0911 710 Pfam Universal stress protein family 40 155 IPR006016 -
Amo08g0911 710 CDD STK_N 38 179 - -
Amo08g0911 710 ProSiteProfiles Protein kinase domain profile. 439 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0911 710 Coils Coil 382 392 - -
Amo08g0911 710 Gene3D Transferase(Phosphotransferase) domain 1 512 708 - -
Amo08g0911 710 Pfam Protein kinase domain 441 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0911 710 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 37 155 - -
Amo08g0911 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 557 569 IPR008271 GO:0004672|GO:0006468
Amo08g0911 710 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 38 709 - -
Amo08g0911 710 CDD STKc_IRAK 445 705 - -
Amo08g0911 710 PANTHER OS02G0152300 PROTEIN 38 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0911 Amo-Chr8 15753273 15757056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0911 114 710 Receptor kinase-like Gene Family AT5G12000 53.577 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Amo08g0911 Pkinase 4.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0911 - - adu:107461003 1275.77