Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0903 ATGGGTGCTTCAGGTAAATGGGTCAAAGCCTTTATCGGCCTCAAGAAGCCCTCCGACAAAGACGAACTACTTCCTGGGAATAATAATAAGACCAAGAAGTGGAGACTATGGAGGACTTCCTCCGGGGACATGTCTTCGTGGAAAGCCTTCAAAGCCAGCACCCACAAACCAGCCTCCGAATGCTCCGATTCACCACCAGCATCTTCAAAAGCCTTCACGGCTGCCATGGCCGCCGTGGTTCGAGCTCCTCCGAAGGATTTCCGACTGGTCAGGGAAGAATGGGCCGCCATCAGAATCCAAACCGCTTTCCGCGGTTTCTTGGCAAGAAGAGCGTTGAGGGCGTTGAAGGGAGTGGTGAGGCTTCAGGCTCTTGTGAGGGGCAGGCAGGTGAGGAAGCAGGCCGCCGTAACACTGAGGTGCATGCAGGCGTTGGTGCGCGTGCAGGCCAGAGTCCGTGCCCGGCGCGTGAGAATGTCCGTTGAAGGACAAGCTGTTCAGGAAATGCTTAACCAGAGACGCACCAAAGCTGATATTCTGAAGCAAGCAGAGGAAGGGTGGTGTGATAGCAGAGGAACATTGCAAGATCAATGGAGATCATCACCAAGTTCTAGTTCAAGAACAAACCTGTCCCTTAAGAATCTAGACATTGACAAATCTAACTGGGGTTGGAGTTGGTTGGAACGTTGGATGGCTGCTAAGCCATGGGAGAGTAGATTAATGGAGGAGTCTCAGGCTGAAATCTCGGATAAAACAACACKSCCTGCTAAGAAATTTGTGGACTCGTTTGGTGCAAATTCGAAACCATCAGAYCCAAACATGGTGAAAGTCAAGAAGAACAATGTCACAACAAGGGTTTCTGCTAGGCCTCCCCAAATTATTGGACAAGCCACTCGTTCATCTTCAAGTCCAAGTTCRGAATTTCGGTATGACGAGAGTTCTGCATCATCTTCTATGTGCACATCCACAACACCAGTATCTGGTAACACTTGTGATAGAACAGAAGATAGCAGCAGCAGCAATAGGCCAAATTACATGAACTTGACAAAGTCAACAAAGGCAAAGCAAAGAAGTAGTAGCAATCAAGTGTATAATAGAGCTCAGAGGCAACAATCCATGGATGATTTTCAGTTCCTCAAAAGGGTAGGGATTTTGTCCAATTTGGATGCAAAGAGCACTGCTGGTTCTGACCATTCAATCAACTTTTCAAGGCCACTTAACTTGGACAAGAGCTCAGTGAAACCACGTTCATCTTCAATTCTCCTCTTTGGTCTCTAA 1275 0.4792 MGASGKWVKAFIGLKKPSDKDELLPGNNNKTKKWRLWRTSSGDMSSWKAFKASTHKPASECSDSPPASSKAFTAAMAAVVRAPPKDFRLVREEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSVEGQAVQEMLNQRRTKADILKQAEEGWCDSRGTLQDQWRSSPSSSSRTNLSLKNLDIDKSNWGWSWLERWMAAKPWESRLMEESQAEISDKTTXPAKKFVDSFGANSKPSDPNMVKVKKNNVTTRVSARPPQIIGQATRSSSSPSSEFRYDESSASSSMCTSTTPVSGNTCDRTEDSSSSNRPNYMNLTKSTKAKQRSSSNQVYNRAQRQQSMDDFQFLKRVGILSNLDAKSTAGSDHSINFSRPLNLDKSSVKPRSSSILLFGL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0903 424 MobiDBLite consensus disorder prediction 265 345 - -
Amo08g0903 424 Pfam Protein of unknown function (DUF4005) 313 361 IPR025064 -
Amo08g0903 424 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 208 414 - -
Amo08g0903 424 MobiDBLite consensus disorder prediction 258 345 - -
Amo08g0903 424 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Amo08g0903 424 Gene3D - 90 140 - -
Amo08g0903 424 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Amo08g0903 424 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Amo08g0903 424 SMART iq_5 91 113 IPR000048 GO:0005515
Amo08g0903 424 SMART iq_5 114 135 IPR000048 GO:0005515
Amo08g0903 424 PANTHER IQ-DOMAIN 5-RELATED 1 195 - -
Amo08g0903 424 PANTHER IQ-DOMAIN 5-RELATED 208 414 - -
Amo08g0903 424 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0903 Amo-Chr8 15664207 15666459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0903 1 415 IQD Protein Family AT2G26180 54.343 7.23e-122 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0903 - - gmx:100799714 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0903 08 15664207 15666459 Amo17g2910 17 131272193 131274259 hybridization