Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0902 ATGGATTTGGATTGGTTGTTCCCAATAGACAGTAATTCTTCTTCATTAACAGCAATATTATTCACTGTGGTGGCGATCATGGGAGGGTTGCTGGCCTATTTGTATGGGCCATATTGGAAGGTGAGGCAGGTTCCAGGCCCACCAACATGGCCTCTGGTAGGACATCTTCATCTCATGGCTAAGTATGGTCCTGATTTGTTCACTCTCCTTGCCAAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAGCCACTAATAATAATCGCAGATCCAGAAGTGTGTAGAGAGGTTGGAACAAGAAAGGCTAAAGAAATTCCAAACAGAAGCATGCCCTCCCCTGTTTCTGCTGCCCCTATTCACCAAAGGGGTCTCTTCTTCACCAAGGATGAACAATGGTCTACTATGAGAAGCACTGTAACTTCCTTCTTCCACACGTCATTCATATCAAGTATGGTGCCAACAATGCTGTCATTCATAGAACCCGCAACCCAGATTCTTGATTCCCATGCAGAAGCACAACAAGACATCAACTTCTCTAACTTCTCTCTCAGATTAGCAACCGATGTTGTTGGCCAAGCATCCTTTGGTGTCAACTTCGGCCTCTCCAACCCTCATTCCACCAAGAATGATGCCGAAGATGGCGAAGATGAAGTGTCACAATTCATCAACCAACATATCTTCAACACCACACACCTCAAGATGGACTTGTCCGGTTCCTTATCCATCATAATTGGTCTGATTCTCCCAATTCTTCAGGAGCCATGCAGGCAGATTCTCAAGAGGATACCTGGCACCATGGACTGGAAAATTGAGCATGGTAATCGTAGTCTAAGCGGCCGTATAGATAGGATTATAGAGAAGAGAATGGAAGAGAAGGGAAGAAGTTCAAAGGATTTCTTATCAATTGTGCTGAGTGGAAGAGAAAGAAAACAGAACTACCTCACACCAGACTACATAAGTGCTCTTACATATGAACAGCTTCTTGCAGGGTCAACTACCACATCCTTTACCATGTCTTCCATTGTATACTTGGTTGCTGGGCACCCTCACGTTGAGAAAAAGCTTCTTCAAGAGATTGATGCTTTTGGTCCAAAGGACAAGATTCCCACTCCTCAGGATCTTAAGGAAAAGTTTCCTTATCTTGACCAGGTGATTAATGAGTCAATGAGGTATTACATGGCATCCCCATTAATTGCAAGGGAAGCATCAACTGATGTAGAGATTGGAGGTTACCTTCTTCCCAAGGGGACCTGGGTGTGGTTAGCCCTCGGAGCTCTATCAAAAGACCCAAAGAGCTTTCCGGAGCCAGAGAAGTTCAAACCGGAGAGGTTTGATCCAAATTGTGAAGAAATGAAAAGAAGGCATCCCTATGCTTTTATTCCATTTGGAATTGGTCCCCGGATTTGCATTGGCAAGCAATATGCTCAACAAGAGGTCAAGCTTACATTGATTCATTTATACCGCAGATTCGTGTTTCGCCACTCACCTAACATGGAAAACCCCTTAGAACTCGACTATGGTCTTGTTCTCAATTTCAAGAATGGTGTCAAGGTCCGAGTTGTAAAAAGAAACATTGACTAG 1587 0.4398 MDLDWLFPIDSNSSSLTAILFTVVAIMGGLLAYLYGPYWKVRQVPGPPTWPLVGHLHLMAKYGPDLFTLLAKQYGPIYRFHMGRQPLIIIADPEVCREVGTRKAKEIPNRSMPSPVSAAPIHQRGLFFTKDEQWSTMRSTVTSFFHTSFISSMVPTMLSFIEPATQILDSHAEAQQDINFSNFSLRLATDVVGQASFGVNFGLSNPHSTKNDAEDGEDEVSQFINQHIFNTTHLKMDLSGSLSIIIGLILPILQEPCRQILKRIPGTMDWKIEHGNRSLSGRIDRIIEKRMEEKGRSSKDFLSIVLSGRERKQNYLTPDYISALTYEQLLAGSTTTSFTMSSIVYLVAGHPHVEKKLLQEIDAFGPKDKIPTPQDLKEKFPYLDQVINESMRYYMASPLIAREASTDVEIGGYLLPKGTWVWLALGALSKDPKSFPEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRICIGKQYAQQEVKLTLIHLYRRFVFRHSPNMENPLELDYGLVLNFKNGVKVRVVKRNID* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0902 528 Gene3D Cytochrome P450 34 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 PANTHER THROMBOXANE-A SYNTHASE 15 525 - -
Amo08g0902 528 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Amo08g0902 528 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 525 - -
Amo08g0902 528 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 Pfam Cytochrome P450 45 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g0902 528 SUPERFAMILY Cytochrome P450 38 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0902 Amo-Chr8 15661370 15665669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0902 82 525 Cytochrome P450 AT2G26170 64.206 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0902 K20771 - gmx:100797803 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0902 08 15661370 15665669 Amo17g2911 17 131274236 131277814 hybridization
Amo16g4017 16 152316180 152322677 Amo08g0902 08 15661370 15665669 PCT
Amo08g0902 08 15661370 15665669 Amo16g4017 16 152316180 152322677 PCT