Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0901 ATGGGGAGAAATAGGATGAAGAATCTGCTTAGGAAGCTGCACATCGGTGGTGGAGACGGCGGCGATGACGGTGACGGTGACGGTGGCGCTTCTCCTACTATGAACGAACTACCGAGTCGCAATCTGAGTGTTGCAGAGCATGAGCGTGAGCATGAGTTTCAATTTCAGATGAGAATGGCGTTGGCCATCAGTGCTTCCCATCCAATTCCAAACAATGACGCTGACTCCGATCAGATCGATGCCGCCAAGCAGATGAGCTTAGGTTCTGAGTCTTCCCTCACACAGTTCCAATCCCTTCGCTATTGGAATTATAGTGTGATAGGTTATGAGGAGAAAGTGATGGATGAGTTTTATGATGTTTATGGAATCTCTTCAAATATCATTCGTCGAGGAAAGATGCCCTTATTGGTGGATCTGCAGGCTAAAACCACCTCACAAAATGGTGATCGTGAAGTCATCTTGGTGAACCGCTTGGTTGATCTTGAGCTGCAGCGGCTTGAGGAAAAGGCCTGTGCCTTATTCAATGACTGTCCTATTTCTGAAAAAGGACTGATTTTAAGTGGCTTGCTGCAGAGACTTGCTGATATTGTTGTTACCAGAATGGGTGGCACAGTTGGTAGTGCAGATAAAATGATAGAAAGGTGGGCTAGGAGGAGTCATGAGTTAAGAGATTCTTCAAGAACCATTGTTCTTCCTCTTGGCTCTCTTGATGTTGGACTGTCGCGTCACCGAGCCCTGCTTTTTAAGGTACTTGCTGACAAGATTAATATTCCTTGCATGCTGGTCAAAGGGAGCTATTACACTGGAACTGATGATGGAGCATTGAATTTGATAAAAGCTGATGATGGAAGTGAATACATCATTGATATGATGGGTGCACCTGGGGTTCTTATTCCTGCTGAGGTGCCAAGCAGTCAGCTCCAAAAGTATAGCTTTTCTGTAAGGAATTGTGAAGAAGTTGTCCGAGTGGGACTGTCTAACCGAACACATTTGATTGATACTAGAACTCAAGTCTTGGGTAGCTCACCTGATCAGTGCAGCAAAAAAACAAAAGCAGTCAGGTCCCAGTCAGAAAAACCATTAAATGTGGGTGGTCAAACAAAACTAGTTGATAATATCCATGTTGGAATGAATGAAAGAGAGAGGTTTGGACATAATTTGGGAAATCTTTTAGAGTCACTGCATAAATCATGTGAATTCTTATCACATAGAGAAACATCACCTGCAGAAAAGATTCGCGTAAACAATGTATCCAAGTATGTCCTCAGTGCAGCAAAGAACCCGGAATTCGCACAAAAACTACACGCAGTTTTGCTAGAGAGTGGAGCCCTCCCCCCACATGATCTCTTTTCAGTTGTAAATCCACAAGATATGGGTGAAGATAAAACATGTGAAGAATTTGTCAGGGATATCGTTCAAGATGATCCAACTAGGTTGTCATTAAGCTACAACAAATCTCTCATACCCTATCAAATGAAGCGCACTGCCCATGATACTAGGTCAGAACAGCAGAAAGAATTTTACGTAGATAGATATGATAATTCCACACAGTGTGATTGTGAATGTGATAATACCGGGAAGGGGTCTGTGATGGTTTGTGACAATAGAGTTGATGGGTTAGAGCAATCTCATTACTTATGTAAAGAGCAATGTCTCCAATCTGATTTGCCCAAGAGAGCTGTTTCTTGTGAAACACGTGATAGGTTTGATGTTTCCCATGATGGGGATGACAAAAATGGTTATAATGAGGTTGGTGTAGCTTTAAATGACGTTGGATTTTGTAAAGAGTCAGCCATTCAGATAAATAAGGCACCCTGTATAGAGTCAGCAAAGTGTATCACATATGATCATAAAAATGACAGAGTTAACCCAGTCTTGGGGGAGAGGAAAGAATGGGAAATTCAATGGGAGGATCTTCGTATTGGTCAACGTATTGGTATCGGTTCGTGTGGTGAGGTTTTCCATGCTGATTGCAACGGTTCGGAAGTTGCTGTGAAGAAGTTTCTAACACAAGATTTTTCTAGTGATGCAGTGGCTCAGTTCAAATCTGAAGTTGAGATCATGTTAAGACTGCGGCATCCCAATATTGTGCTCTTCATGGGAGCTATTACTCGTCCGCCACATCTATCCATCTTGACAGAGTTTCTTCCAAGAGGGAGTTTATATGGTCTATTGCGTAATCCTAAGTTTCAACTTAATGACAAGAGGCGGTTGCGTATGGCTGTTGATGTGGCTAAGGGAATGAACTACTTGCACACAAGTCATCCTCCCATTGTCCATAGAGATTTGAAGTCTCCGAATCTTCTTGTCTCCAAGCATTGGGTTCTTAAGGTCTGTGATTTTGGTCTATCGCGGATGAAGCACCATACATTTTTGTCATCAAAGTCCTATGCTGGAACGGCCGAGTGGATGGCACCAGAAGTCTTAAGAAACGAGCTTGCCAATGAAAAGTGTGATATATATAGTTTTGGAGTAATCTTGTGGGAGTTGGCTACKACAATGATCCCGTGGCAAGGTTTGAACCAAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAACAGGCGCCTTGAAATTCCAGATGATGTTGATCCAGAAGTAGAACAGATAATACGTGATTGTTGGCAAATGGATCCACAGTTACGGCCATCATTCTCCGAGTTATTATCTCGCCTCTGCCAACTTCAACATCTTGTTGTCGTTAAAGGTGTAAAACGAGCTCCACACATCAAATGA 2733 0.4281 MGRNRMKNLLRKLHIGGGDGGDDGDGDGGASPTMNELPSRNLSVAEHEREHEFQFQMRMALAISASHPIPNNDADSDQIDAAKQMSLGSESSLTQFQSLRYWNYSVIGYEEKVMDEFYDVYGISSNIIRRGKMPLLVDLQAKTTSQNGDREVILVNRLVDLELQRLEEKACALFNDCPISEKGLILSGLLQRLADIVVTRMGGTVGSADKMIERWARRSHELRDSSRTIVLPLGSLDVGLSRHRALLFKVLADKINIPCMLVKGSYYTGTDDGALNLIKADDGSEYIIDMMGAPGVLIPAEVPSSQLQKYSFSVRNCEEVVRVGLSNRTHLIDTRTQVLGSSPDQCSKKTKAVRSQSEKPLNVGGQTKLVDNIHVGMNERERFGHNLGNLLESLHKSCEFLSHRETSPAEKIRVNNVSKYVLSAAKNPEFAQKLHAVLLESGALPPHDLFSVVNPQDMGEDKTCEEFVRDIVQDDPTRLSLSYNKSLIPYQMKRTAHDTRSEQQKEFYVDRYDNSTQCDCECDNTGKGSVMVCDNRVDGLEQSHYLCKEQCLQSDLPKRAVSCETRDRFDVSHDGDDKNGYNEVGVALNDVGFCKESAIQINKAPCIESAKCITYDHKNDRVNPVLGERKEWEIQWEDLRIGQRIGIGSCGEVFHADCNGSEVAVKKFLTQDFSSDAVAQFKSEVEIMLRLRHPNIVLFMGAITRPPHLSILTEFLPRGSLYGLLRNPKFQLNDKRRLRMAVDVAKGMNYLHTSHPPIVHRDLKSPNLLVSKHWVLKVCDFGLSRMKHHTFLSSKSYAGTAEWMAPEVLRNELANEKCDIYSFGVILWELATTMIPWQGLNQMQVVGAVGFQNRRLEIPDDVDPEVEQIIRDCWQMDPQLRPSFSELLSRLCQLQHLVVVKGVKRAPHIK* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0901 910 MobiDBLite consensus disorder prediction 13 37 - -
Amo08g0901 910 CDD STKc_MAP3K-like 645 891 - -
Amo08g0901 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 758 770 IPR008271 GO:0004672|GO:0006468
Amo08g0901 910 Pfam Ethylene-responsive protein kinase Le-CTR1 95 298 - -
Amo08g0901 910 Gene3D Transferase(Phosphotransferase) domain 1 718 901 - -
Amo08g0901 910 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 40 901 - -
Amo08g0901 910 ProSiteProfiles Protein kinase domain profile. 639 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0901 910 PRINTS Tyrosine kinase catalytic domain signature 713 726 IPR001245 GO:0004672|GO:0006468
Amo08g0901 910 PRINTS Tyrosine kinase catalytic domain signature 752 770 IPR001245 GO:0004672|GO:0006468
Amo08g0901 910 PRINTS Tyrosine kinase catalytic domain signature 799 809 IPR001245 GO:0004672|GO:0006468
Amo08g0901 910 PRINTS Tyrosine kinase catalytic domain signature 818 840 IPR001245 GO:0004672|GO:0006468
Amo08g0901 910 PRINTS Tyrosine kinase catalytic domain signature 862 884 IPR001245 GO:0004672|GO:0006468
Amo08g0901 910 SUPERFAMILY Protein kinase-like (PK-like) 624 891 IPR011009 -
Amo08g0901 910 PANTHER SERINE-THREONINE PROTEIN KINASE 40 901 - -
Amo08g0901 910 SMART serkin_6 639 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0901 910 Pfam Protein tyrosine and serine/threonine kinase 639 891 IPR001245 GO:0004672|GO:0006468
Amo08g0901 910 Gene3D Phosphorylase Kinase; domain 1 632 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0901 Amo-Chr8 15329517 15335494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0901 26 897 MAP Kinase Kinase Kinase AT5G11850 52.252 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo08g0901 PK_Tyr_Ser-Thr 2.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0901 K04424 - gmx:100779790 1033.86