Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0868 ATGGTTACTCTGCGTCTCCATATGGAGGTTTTGAGGCTTGTTGTCGCTGGGGAAAGTATAGGAAAGATCGTGTATGTCAGGAAGAGGAGTGAAAGGCGTGGCAGTGGATGGTTGAAATGTTGGGTCCTTGAAGAGGTGTTGGTTATTAAGATGGAGGAAGATGGCTACGATGGAGATTCTTTTAACCAAGCACTGGGTAATTTTAGCAAGTCATCAGAGGCAGGTTTGTTAAGTGCAGAGGATGTGTTGAAGTTGGAGTTTGGTTTACAGCTGAGCAAAGGGTTTTGCGATACGACAGGGGAAGAAATTGAAGAACTAGAAAGGGGAGATAGGAAGAGGGAACAGAAGGTTGTTACTCGGTGTGGATGTCTTGCTGAAATGCGGATAAAACCGAATGGTGAGACAGGGAAGTGGTTTGTGTCACGCTTTGTGGATGATCATAACCACGAGCTACTACCCAAAAAATTTGTAGAGTACCTACCTTCATATCGGAAGGTTTCTGATGTTGATATAGCTCACATGGATAGCTTGAGGCAAGTTGGGATCTCGATTCCGAAGATATACAAGTCATTTGCTGCATAG 582 0.4433 MVTLRLHMEVLRLVVAGESIGKIVYVRKRSERRGSGWLKCWVLEEVLVIKMEEDGYDGDSFNQALGNFSKSSEAGLLSAEDVLKLEFGLQLSKGFCDTTGEEIEELERGDRKREQKVVTRCGCLAEMRIKPNGETGKWFVSRFVDDHNHELLPKKFVEYLPSYRKVSDVDIAHMDSLRQVGISIPKIYKSFAA* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0868 193 Pfam FAR1 DNA-binding domain 96 153 IPR004330 -
Amo08g0868 193 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 100 182 IPR031052 GO:0006355
Amo08g0868 193 PANTHER OS02G0262500 PROTEIN 100 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0868 Amo-Chr8 14915569 14916855 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo08g0868 FAR1 2.5e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0868 - - adu:107486709 162.925