Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0847 ATGGCACAGCTTAGTTTGTGTAATTGTTGTAGTGGCGGCAGAAGCTCCTTGTCTCAAGTTTTAATTGTCTTTGCACTTGTGTTAGAGATCATTTGCTCTTTTCAGCTTTCAACATCTCACTCCATAGTGCAATCCCTTCCTGGATTCCAAGGACCCCTGCCTTTTGTTCTTGAAACTGGGTATGTGGGTGTGGGTGAAACTGAAGAGGAGCAAGATGGTGAAGTGTTCTACTATTTCATTCACTCAGAGAACAACCCCAAAGAGGACCCTCTCCTTCTTTGGCTTACGGGTGGCCCTGGTTGCTCTGCTTTTTCTGGCCTTGTCTTTGAAGTAGGTCCTTTATCATTTATAAACGAGGAATACAATGGGAGCTTGCCAAATCTGGTTTTGAAGCCACAGTCATGGACAAAGGTTTACAGTGTAATATTCGTAGATTTACCTGTGGGTGCTGGATTCTCTTATGCCAAAACAGAACGTGCTGTTCACCAAAGTACCCGGAAAGTATGGCTGGTTGATCATCCGGAATTTCTATCAAATGAAGTGTACATTGCGGGCGATTCAGTGTCTGGGCTTCCCATTCCAGCAATTGTTGAAGAAATTTCAAATGGAAATGAAGGTGGCGTCCAGCCACATATAAATCTCCAGGGGTACCTGCTGGGGAATCCCTTTACAACATTTACCGAAGATAACTATGCAGTAGCATTCAATCATGGCATGGGACTCATTTCTGATGAATTATACGAGGTTAGAAAACTCGTGGGTCCTCAGACTATTTCAGGAATTTATGTATGCCACATTTTGGAGCCTAACTGCGAGTTCGCCTTGCGTAAGGCATGGAGGAGGAGATCTCTGACTCTAACTGATCAGCTCCACAAGTTTCCGATCCTTGCAGTCCCACCCTTAAGCTGTCGGGTGGTAGCCAGAGTTTTATTCATTCAACCACTAGGGTCCAAGTCAAAGCAGAGCACCAAGAGTACCAGGGTGAGTCATGCATATTTACTATGTACCTATTGGGCCAATTTTGAAGATGTTCGCAAGGCACTAACCGTTCGAAAGGGTAGTATAGGAAAATGGCAGCGCTGTAACTATGACATACTTTACGAGCATGATATTCGAAACAGCGTCCAATATCATGAAAATCTAAGCAGTAAAGGCTATCGTTCATTAATATACAGTGGGGATCATGACATGATAGTTCCATTCTTGGCGACCCAAGCGTGGATTCGATCTTTAAACTACACCATCGTGGATGAGTGGAGGCAATGGTACGTCAATGGTCAAGTTGCAGGATATACTAGGACTTATTCAAATCGGATGACGTTTGCAACTGTGAAAGGTGGAGGACATACAGCTACCGAGTACAAACCTGAAGAATGTTTAGGCATGTTCATTAGGTGGATATCTAAAAGGCCATTATAG 1419 0.4383 MAQLSLCNCCSGGRSSLSQVLIVFALVLEIICSFQLSTSHSIVQSLPGFQGPLPFVLETGYVGVGETEEEQDGEVFYYFIHSENNPKEDPLLLWLTGGPGCSAFSGLVFEVGPLSFINEEYNGSLPNLVLKPQSWTKVYSVIFVDLPVGAGFSYAKTERAVHQSTRKVWLVDHPEFLSNEVYIAGDSVSGLPIPAIVEEISNGNEGGVQPHINLQGYLLGNPFTTFTEDNYAVAFNHGMGLISDELYEVRKLVGPQTISGIYVCHILEPNCEFALRKAWRRRSLTLTDQLHKFPILAVPPLSCRVVARVLFIQPLGSKSKQSTKSTRVSHAYLLCTYWANFEDVRKALTVRKGSIGKWQRCNYDILYEHDIRNSVQYHENLSSKGYRSLIYSGDHDMIVPFLATQAWIRSLNYTIVDEWRQWYVNGQVAGYTRTYSNRMTFATVKGGGHTATEYKPEECLGMFIRWISKRPL* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0847 472 Gene3D alpha/beta hydrolase 49 471 IPR029058 -
Amo08g0847 472 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 23 249 - -
Amo08g0847 472 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 317 471 - -
Amo08g0847 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 23 249 IPR001563 GO:0004185|GO:0006508
Amo08g0847 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 317 471 IPR001563 GO:0004185|GO:0006508
Amo08g0847 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Amo08g0847 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Amo08g0847 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Amo08g0847 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Amo08g0847 472 Pfam Serine carboxypeptidase 47 468 IPR001563 GO:0004185|GO:0006508
Amo08g0847 472 SUPERFAMILY alpha/beta-Hydrolases 43 471 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0847 Amo-Chr8 14645353 14650360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0847 37 66 Calmodulin-binding Proteins AT2G22960 63.333 3.90e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0847 K16296 - gmx:100792006 537.724