Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0839 CAGAGTACTGACCAGGAAGCTTTGAAGAAGATATTGGTAGCTACACATGACAAGTCTCAAAAGAAGGTTGATAAAGCTATAGAGGACATACAAAAAGATAAACTGTGTGAATCAGACATTGAAGTAGTAGAGGAAATTAACTTTTCAGTTTCTGAAGTGAAGAGCAAGTACAAGGATGCTACCCTCTTACCAAAATGGAAAGCATTTCAGACAATCATATATCTTGAACAGGATGATGGCCTGAATGACTCAAGTAAAATTGCTGCATTTGATTTTGATGGCTGTCTTGCAAAAACTGCTTTCGTCATGTATCCTTCAATTCCTGATAAACTACAAAGCTTATACAAGGATGGGTACAAGCTGGTAATTTTCACCAATGAATCCAATATTGAACGTTGGAAAAATAAGAGACAAGTAGCCGTGGACTCAAAAATTGGACGTCTCAATAATTTTATTGAGAAAGTGAAGGTTCCAATTCAGAAATCATCATCTGCTGCTGGATTGACTGCAACAGTTGCTAAGGAACCAGAAACTGGAGAGTTTTGTATTGAGATTTAG 558 0.3692 QSTDQEALKKILVATHDKSQKKVDKAIEDIQKDKLCESDIEVVEEINFSVSEVKSKYKDATLLPKWKAFQTIIYLEQDDGLNDSSKIAAFDFDGCLAKTAFVMYPSIPDKLQSLYKDGYKLVIFTNESNIERWKNKRQVAVDSKIGRLNNFIEKVKVPIQKSSSAAGLTATVAKEPETGEFCIEI* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0839 185 PANTHER BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE 26 160 - -
Amo08g0839 185 Pfam Polynucleotide kinase 3 phosphatase 86 160 IPR013954 -
Amo08g0839 185 Gene3D - 64 179 IPR023214 -
Amo08g0839 185 SUPERFAMILY HAD-like 69 137 IPR036412 -
Amo08g0839 185 TIGRFAM HAD-SF-IIIA: HAD hydrolase, family IIIA 86 160 IPR006549 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0839 Amo-Chr8 14549435 14551612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0839 161 184 Core DNA Replication Machinery Family AT5G44635 100.000 8.33e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0839 K08073 - adu:107461119 239.195