Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0838 ATGCAGTTCGCTTCGGCACGCACGTGTGCCTCCGCGATCTCCACCGTCGTCATCGACTCTATCGCTGCTCTGCCGTGTTCTTCTGCTCTTTCGAATTCGAACATGTCGAAGGACAAACACTCTACCAATTTGTCGTGCACCTTCAAGTGGCTCTTAGCTACTCAATTCTTGTCAATAAGAATTCCATTTATTTTCAATACATGGATTGTAAGGCATCTTACACAAGAGGACTATGCGGATAAGATGTGTCATAGGAAGTTCGATCACCCAAGACACAGTTCTCTTGGCTGTCTTCCAAGGATGCCAGCTTCTCGTCATCATGGAAAAGGTTATCTAGGATCCTTGCCAAAGGCTGGAGGGTTTCCTCCTCTTGGTGCACATGGGATGTCAAATCCTACCACTGTAGCACATGCTGCAGTTTCTGGAGGAGCCACTATAGGTCTTGGATGTCAAATCCTAACACAAGCATGCACACTAACATCCCCCCGCCCCCCTTTCCCACAATTTCAAGAAAGATATAAATATACATTTTTTTTATATTGTTGTATGATGCAACCAGTGAAAAATGAGTCAAGTTTGTTAATATTGTAA 591 0.4416 MQFASARTCASAISTVVIDSIAALPCSSALSNSNMSKDKHSTNLSCTFKWLLATQFLSIRIPFIFNTWIVRHLTQEDYADKMCHRKFDHPRHSSLGCLPRMPASRHHGKGYLGSLPKAGGFPPLGAHGMSNPTTVAHAAVSGGATIGLGCQILTQACTLTSPRPPFPQFQERYKYTFFLYCCMMQPVKNESSLLIL* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0838 196 Gene3D Ribosomal protein L3, domain 3 82 144 IPR044892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0838 Amo-Chr8 14547039 14549358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0838 82 123 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 54.762 1.02e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0838 K06316 - gmx:100811128 80.1073