Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0813 ATGTGCTCCGGCGAGTCAACTATGAACGGCGCTCAGTCGCGAGACGATGAGTCGAAAGAAGACGACAGGGACGCAGAAGCGAACCGMCYGCTGCACCAWCAGCAGCAGAAGCAATCGACGTCATCGAAGGATGACGAAGAGGTGGCGTACGAGGCAGGGGAGAAGATCCAGGTGGTAGATTTCGACTCGGTGGACGGCGRTGACGATTCAGGTGTTCCCCCTCCGTTCTCGTGGAAGAAGCTGTGGCTGTTCACTGGTCCCGGGTTCCTGATGAGCATAGCGTTCTTGGATCCGGGGAATCTCGAAGGGGATCTCCAGGCTGGAGCCATCGCAGGGTACACGCTTCTATGGCTGCTRATGTGGGCCACCTTCATGGGCCTCTTGATACAGCTTCTCTCGGCGAGGATTGGGGTGGCCACTGGGCGCCACCTGGCAGAGCTATGCAGGGAGGAATATCCCAATTGGGCGAGGCTAGTTCTATGGTTCATGGCCGAGCTGGCACTCATTGGGGCTGATATTCAAGAGGTCATTGGCAGTGCCATCGCTATCCAAATTCTGAGCCGCGGGGTTTTCCCACTCTGGCTTGGAGTTTTGATTACCGCTTCTGATTGTTTTGTCTTTCTATTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCAGTTCTCATTGCTACTATGGCTCTTTCTTTTGCCTGGATGTTTGCTGACACGAAACCTAGTGAGAAAGAACTTTTGACGGGTATTTTGCTTCCAAGACTTAGTTCGAAAACAATTCGTCAAGCTGTCGGTGTTGTTGGTTGTGTCATAATGCCTCACAATGTATTCTTGCATTCTGCTTTAGTGCAGTCAAGGAAGATAGATCCCCAGAAGAAAGGACGGGTACAGGAGGCTCTCAACTACTATACAATTGAATCAACAGTTGCACTTGCAGTCTCCTTCATGATCAATCTATTTGTCACGACAGTTTTTGCCAAGGGATTTTATGGCACAAAGCAGGCCGATAGCATCGGATTGGTGAATGCAGGGCAGTACCTTGAGGAAAAGTACGGAGGAGGAATCTTCCCCATTCTTTATATATGGGGCATTGGGTTATTGGCAGCTGGACAGAGTAGCACCATCACAGGCACATATGCTGGCCAATTCATAATGGGTGGTTTCCTCAACCTTCGGTTAAAGAAATGGTTGAGAGCATTGATCACTCGTAGTTTTGCAATTGTGCCAACTATAGTCGTAGCTATTGTTTTTAATACATCAGAAGCCTCATTGGATGTTTTGAAYGAATGGCTTAATGTGCTTCAGTCCATGCAAATTCCCTTTGCACTGATTCCCCTCCTGACWTTGGTCTCCAAGGAGCATATCATGGGGACCTTTAGGGTTGGGCCTGTTCTTGAGAGGGTGGCATGGACTATTGCTGCACTTATAATGGTAATTAATGGGTATCTCTTGTTAGATTTCTTCCTGTCTGAGGTGAAGGGCCTGCTGCTTGGTTTTGTAGTTTGTTCCTGCACAGCTGCCTATGTTGCATTCATTGCATATTTGGTTTCTCAGAGCGGTGCTCTTCCACACACTTGGGTTAATAGAATCCCCAAGGGTTTTTCTCTCCTTCAAATTGAATCAACAAATTCATACGACATTAAAAATCCGGAAAATAGTACTGCAAACTCCAGCTAA 1680 0.4774 MCSGESTMNGAQSRDDESKEDDRDAEANRXLHXQQQKQSTSSKDDEEVAYEAGEKIQVVDFDSVDGXDDSGVPPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYTLLWLLMWATFMGLLIQLLSARIGVATGRHLAELCREEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGVFPLWLGVLITASDCFVFLFLENYGVRKLEAAFAVLIATMALSFAWMFADTKPSEKELLTGILLPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPQKKGRVQEALNYYTIESTVALAVSFMINLFVTTVFAKGFYGTKQADSIGLVNAGQYLEEKYGGGIFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIVVAIVFNTSEASLDVLNEWLNVLQSMQIPFALIPLLTLVSKEHIMGTFRVGPVLERVAWTIAALIMVINGYLLLDFFLSEVKGLLLGFVVCSCTAAYVAFIAYLVSQSGALPHTWVNRIPKGFSLLQIESTNSYDIKNPENSTANSS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0813 559 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 28 529 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0813 559 PANTHER BNAC08G04640D PROTEIN 28 529 - -
Amo08g0813 559 Pfam Natural resistance-associated macrophage protein 102 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0813 559 MobiDBLite consensus disorder prediction 1 48 - -
Amo08g0813 559 MobiDBLite consensus disorder prediction 12 30 - -
Amo08g0813 559 PRINTS Natural resistance-associated macrophage protein signature 215 236 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0813 559 PRINTS Natural resistance-associated macrophage protein signature 190 209 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0813 559 PRINTS Natural resistance-associated macrophage protein signature 371 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0813 559 PRINTS Natural resistance-associated macrophage protein signature 433 452 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0813 559 PRINTS Natural resistance-associated macrophage protein signature 160 186 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0813 559 PRINTS Natural resistance-associated macrophage protein signature 264 287 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0813 559 PRINTS Natural resistance-associated macrophage protein signature 399 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0813 559 Hamap Divalent metal cation transporter MntH [mntH]. 67 489 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo08g0813 559 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 79 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0813 Amo-Chr8 14308544 14312364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0813 15 520 Inorganic Solute Cotransporters AT1G47240 78.458 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0813 K21398 - gmx:100795013 879.011