Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0811 AGTTGTCTCTTTCAATATCCCTCCCTTCAAACTTGGCACCCTCTTCCTCTCTTCTCTGCTCCTTCTTATTACCCTCTCGCTTTCTCTGTCCCCTTTCTTCAACGAGAGCCACCTTCAGAGATGGAGACTCGTGCCGCCGCAAAGAGGAGGGCCATCACCGCAAACCTCACTGAGACTCAACCCCTCAAGAGGAAGCGCGTTGTGTTGGGTGAAATTACCAATTTTCCTACTGAAAATTTGAATACTCAGAAACCAAAATCCAAATGCCTCAACAATGCCAAGCCCAAGAAAGCCTCTGTCGCCGACAAGAACATGAAGGTTGTCAAGGAGAAAGAGAATGTGCTTGATGATGAAGATGACAAGCTCAATGTTGACCCTGTTGCCTCTGATATCTATCTGTACCTTCGGAAGATGGAGTTGGAGAAGAATAGAAGACCGAGAGTTGATTACCTTGAGAGGATTCAGAAAGATGTAACTGCGAACATGAGAGGGATTTTGGTGGATTGGTTAGTGGAAGTTGCAGAGGAATACAAGCTTCTCTCTGACACACTATATCTTTCAATTTCTTACATTGATAGGTATCTCTCCACGAATCGTGTCACCAAGCCTTATCTTCAGTTGCTCGGTGTTTCATCAATGCTCATTGCCGCGAAATATGAAGAGATTAATCCTCCTCATGTGGAGGAGTTCTGCTTTATCACTGATAACACATACAAGAAATCAGAGGTAGTGGAAATGGAAGCTAACATACTGAACTCTTTGAATTTTGAAATGGGTAGCCCAACTATTAAGACCTTTTTAAGGAGGTTTAATGAGATTGCTTGTGAGAGTCAAAAGGGTCAAAAGTTGCAGTTTGAGTTTCTGTGTTATTACCTTGCTGAACTAAGCTTGTTGGAATATGGATGTTTGAAGTTCTTGCCTTCTTTGGTGGCTGCTGCTGTTATATTTCTTGCTAGATTTATCATGTCGCCTAAATCGAACCCATGGACTTTAACCCTTTATGACCGCACTGGATATGATTCACTTCAGTTGAAAGAATGTGTTCTGATCTTACTTGACTTGTATTTGGGAAGAAGGGGAGCATGCTTCGAAGCTATTAGGAAGAAATACAAGCAGCACAAGTTCAAGTATGTGGCAAACTTTCCTTCCCCTCCCCAGATACCGAATTCATGCTTTGAAGATGACTTTTATGAAGAAAACTTTTATGAGTGA 1212 0.4216 SCLFQYPSLQTWHPLPLFSAPSYYPLAFSVPFLQREPPSEMETRAAAKRRAITANLTETQPLKRKRVVLGEITNFPTENLNTQKPKSKCLNNAKPKKASVADKNMKVVKEKENVLDDEDDKLNVDPVASDIYLYLRKMELEKNRRPRVDYLERIQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLSISYIDRYLSTNRVTKPYLQLLGVSSMLIAAKYEEINPPHVEEFCFITDNTYKKSEVVEMEANILNSLNFEMGSPTIKTFLRRFNEIACESQKGQKLQFEFLCYYLAELSLLEYGCLKFLPSLVAAAVIFLARFIMSPKSNPWTLTLYDRTGYDSLQLKECVLILLDLYLGRRGACFEAIRKKYKQHKFKYVANFPSPPQIPNSCFEDDFYEENFYE* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0811 403 PANTHER CYCLINS 57 395 IPR039361 -
Amo08g0811 403 SUPERFAMILY Cyclin-like 261 386 IPR036915 -
Amo08g0811 403 PANTHER CYCLIN-A3-1-RELATED 57 395 - -
Amo08g0811 403 SMART cyclin_7 265 353 IPR013763 -
Amo08g0811 403 SMART cyclin_7 168 252 IPR013763 -
Amo08g0811 403 Gene3D - 146 259 - -
Amo08g0811 403 SMART Cyclin_C_2 261 384 IPR004367 -
Amo08g0811 403 Pfam Cyclin, C-terminal domain 261 383 IPR004367 -
Amo08g0811 403 ProSitePatterns Cyclins signature. 163 194 IPR006671 -
Amo08g0811 403 CDD CYCLIN 261 352 IPR013763 -
Amo08g0811 403 SUPERFAMILY Cyclin-like 119 258 IPR036915 -
Amo08g0811 403 Pfam Cyclin, N-terminal domain 130 258 IPR006671 -
Amo08g0811 403 Gene3D - 130 380 - -
Amo08g0811 403 CDD CYCLIN 162 251 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0811 Amo-Chr8 14270243 14272321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0811 43 394 Core Cell Cycle Gene Families AT1G47230 52.925 8.14e-126 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0811 K06627 - pop:7472680 416.387