Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0797 ATGTCACTGACTGGTAAACCCCCTCCTGAGATCAGAATTGAAGGAGAGAATTGCCCTCGTGCGGTGGTGGAATGGTACCAATGTTCAGCGTCAAAGGATCAAAGACACGATTTTGACCTGAGCTTGAAGGCGAAGAAACACCTCGTTTCGTTGGGTTGGATCTTTTCTTATTGCGACAAGAAAACTCGCTGGGAACTTCGTTACAAATCCCCTTCTGGTAAGACCTACATTTCTCTCAGAACTGCATGCAAAGCCTGCATTGAAGAGAATAACAAAGATTCTTCATCTACTTCCAATGGATCACACCAATCTCTACCTGTTGCATCACCGTCTTCTGCTCAACAACCTACGAGTTCCAAGGTAACCGGTGGTAGGCCTCGGAGACGCAAGAAACCGAGTGACGATGAAGATTGGACTCCTACGTCTCATCAATTATCCAATTTAGTAAGTCCTCGTGGCGGTGGCGGTCGTCGTCGTGATTCTGGTGAAAGTCCTAATGCTGCAAGAAAAGTAACGAGGGAACGGAGTTCTTCTGATAATCCTAATTTGCCGGCGTTTCGGAATCCAAGAACGATTCTTTCTTGGCTGATTGACAACAATGTGGTGGCGCAAGAGGCGTGGGTTTTCTGCTGTGGAGGGAAAGATAATGAATTGGTGAAGAGAGGGAAGCTGTTTCGTTCTGGTATTGGCTGCCATTGTTGTGATTCTTTGCTTACACTCTCTCAATTCGAGGTTCATGCCGGTTGCAAAGGTCAACCTCCCTCTGCTAGTATCTTCTTGGAACATGATACAAGGTCTTTGTTGGATTGTCAGAACCAAGCATTGATGATGATCAAGGCTAACAACAATGGGGATAATGATCATCATCATGAAAATGATTCCATTTGTTCAATTTGTCTCAAGGGGGGTTTCATTCTTCTCTGTGATCGCTGTCCGGCGTCATTCCACGCTGAATGTATTGGCCTTGATCATGTTCCCCCTGGTGATTGGTTCTGCCCTTCATGTTCTTGCAGAATTTGCAACCGTCCCAAATGCAGAGAAGATTCTTCTAGACAGGAAAGTCATTTGGCTAACAATTTTATAGCTTGTTATCAGTGTCACCGCAGATTCCACATTGGATGTTTAGCAGCTTCTAGAGACTTTGCTTTTCTGGAAATGGAAACCGATTGTAATGAGCTTTGGTTTTGCAATAAAGCTTGTGAGAAGATATTTTTGACACTGAATAGCATGTTGGGAAAACCAATTCTTGTGGGTGATGGTAATCTAACTTGGACACTGTTGACGAGCCTCAAGAATAGCAATAATGACAATGATGACGATGGATACATTACTGAAATGGAGAGCAAGCTAAATGTCGCACTTGGAGTAATTCATGAGTGTTTTGAGCCCATCATAGATCCTGTGTTTGGAAGAGACATTGCTGCAGATATTATGTTCAGCAGATATTCATGGCTGCCACGTATGAACTTTACAGGGTTCTACACTGTGATTCTAGAGAGGAATGATGAGGTGATCTCTGTTGCAAACACAAGGATTTATGGCCAAAAGGTTGCAGAAGTGCCGCTTGTCGCCACGAGGAACCAGTATCGAAATCAGGGAATGTGTCGAATTCTGATGGATCAGCTTGAGAAGCTGTTGGTTAAGTTGGGTGTTGAGAGGTTGCTATTGCCTGCTGCTCCTAATTTAATAAAATTTTGGACAAACTCATTTGGATTTGCAAAAATGACACACTCAGATCAGTATTACTATGTAGGTTATCCTCTTGCAAATTTTCCGGACACAACATTGTGCCACAAATCATTGAAGCAACCTTTGATGCTGTGTTGA 1827 0.434 MSLTGKPPPEIRIEGENCPRAVVEWYQCSASKDQRHDFDLSLKAKKHLVSLGWIFSYCDKKTRWELRYKSPSGKTYISLRTACKACIEENNKDSSSTSNGSHQSLPVASPSSAQQPTSSKVTGGRPRRRKKPSDDEDWTPTSHQLSNLVSPRGGGGRRRDSGESPNAARKVTRERSSSDNPNLPAFRNPRTILSWLIDNNVVAQEAWVFCCGGKDNELVKRGKLFRSGIGCHCCDSLLTLSQFEVHAGCKGQPPSASIFLEHDTRSLLDCQNQALMMIKANNNGDNDHHHENDSICSICLKGGFILLCDRCPASFHAECIGLDHVPPGDWFCPSCSCRICNRPKCREDSSRQESHLANNFIACYQCHRRFHIGCLAASRDFAFLEMETDCNELWFCNKACEKIFLTLNSMLGKPILVGDGNLTWTLLTSLKNSNNDNDDDGYITEMESKLNVALGVIHECFEPIIDPVFGRDIAADIMFSRYSWLPRMNFTGFYTVILERNDEVISVANTRIYGQKVAEVPLVATRNQYRNQGMCRILMDQLEKLLVKLGVERLLLPAAPNLIKFWTNSFGFAKMTHSDQYYYVGYPLANFPDTTLCHKSLKQPLMLC* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0797 608 Pfam Acetyltransferase (GNAT) family 491 572 IPR000182 GO:0016407
Amo08g0797 608 CDD NAT_SF 496 556 - -
Amo08g0797 608 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 476 586 IPR016181 -
Amo08g0797 608 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 441 593 IPR000182 GO:0016407
Amo08g0797 608 Pfam Tify domain binding domain 222 274 IPR032308 -
Amo08g0797 608 SUPERFAMILY FYVE/PHD zinc finger 272 337 IPR011011 -
Amo08g0797 608 MobiDBLite consensus disorder prediction 90 122 - -
Amo08g0797 608 Pfam PHD-finger 295 337 IPR019787 -
Amo08g0797 608 Gene3D - 448 605 - -
Amo08g0797 608 SMART PHD_3 295 336 IPR001965 -
Amo08g0797 608 SMART PHD_3 337 400 IPR001965 -
Amo08g0797 608 MobiDBLite consensus disorder prediction 90 185 - -
Amo08g0797 608 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 360 IPR013083 -
Amo08g0797 608 MobiDBLite consensus disorder prediction 156 176 - -
Amo08g0797 608 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 10 604 - -
Amo08g0797 608 ProSiteProfiles Zinc finger PHD-type profile. 293 338 IPR019787 -
Amo08g0797 608 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0797 Amo-Chr8 14131261 14133087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0797 125 546 PHD Transcription Factor Family AT5G58610 41.935 1.72e-97 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Amo08g0797 Acetyltransf_1 8.1e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0797 - - aip:107608518 1106.28