Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0792 ATGGATAATGAGAAAAACCATGATGGGGTTTTTGTTCCTTCTTCACATACCGTTGCTGAACATGTCACAATGAATGAAGATGATGAGACAAGTGAAAATCTTGAATTGCCACTAGATAACAAGAAAAAGAGTTTGGAAATTCATCAGAGGAAGGATAATGCAGTAGGGAACAAGAAGAAGCAGAAGGTGGAGAGTAATGGGAAAGAAATAGAAGAAAGTAATGATAATTATACCGCTTTAGAAGATGATAATGGCACTAATAATTATAATAAGGAGGAGAATAGTGGAGGAGCTACTTCTTCAGTATTGAACTCAAATGGGAAGACAAGAGTTACTAGAGGATCAGCAACAGATCCTCAAAGCCTTTATGCAAGGAGGAGAAGAGAGAGGATTAATGAGAGACTAAGAACTCTACAGAGTCTTGTTCCCAATGGAACAAAGGTTGATATAAGCACAATGCTAGAAGAAGCAGTGCATTACGTGAAATTTTTGCAGCTACAGATTAAGCTTTTGAGCTCTGATGATTTGTGGATGTACGCTCCGATAGCTTATAATGGATTTGACATTGGACTCATCAATCTATCTCCTCAACAACATTAA 600 0.3733 MDNEKNHDGVFVPSSHTVAEHVTMNEDDETSENLELPLDNKKKSLEIHQRKDNAVGNKKKQKVESNGKEIEESNDNYTALEDDNGTNNYNKEENSGGATSSVLNSNGKTRVTRGSATDPQSLYARRRRERINERLRTLQSLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGFDIGLINLSPQQH* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0792 199 MobiDBLite consensus disorder prediction 79 119 - -
Amo08g0792 199 PANTHER TRANSCRIPTION FACTOR BHLH139-LIKE 21 189 - -
Amo08g0792 199 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 115 181 IPR036638 GO:0046983
Amo08g0792 199 MobiDBLite consensus disorder prediction 1 127 - -
Amo08g0792 199 Gene3D - 115 172 IPR036638 GO:0046983
Amo08g0792 199 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 115 164 IPR011598 GO:0046983
Amo08g0792 199 MobiDBLite consensus disorder prediction 21 75 - -
Amo08g0792 199 Pfam Helix-loop-helix DNA-binding domain 125 165 IPR011598 GO:0046983
Amo08g0792 199 SMART finulus 121 170 IPR011598 GO:0046983
Amo08g0792 199 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 21 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0792 Amo-Chr8 14047644 14049343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0792 57 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 65.926 6.77e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Amo08g0792 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0792 - - ahf:112705103 375.555