Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0786 ATGACTAGAGTTGGACCCCACTCTGAAATGAGCTGCAACGGTTGCCGGGTGCTCCGCAAGGGATGCAGCGACATGTGCCCCCTGAGGACATGCCTTCACTGGATTCCATCCCCTCAGGCACAAGCTCACGCCACTCTCTTCCTCGCTAAGTTCTTTGGCCGCTCCGATCTCTTCTCCTTCATTTCCTCTGTCCCACACAACAACAGGCCCGAGCTGTTTCAGTCTCTGCTTTATGAAGCTTGCGGACGAACCATCAATCCCGTCAATGGCGCTGTGGGCCTGCTCTCCACTGGTAACTGGCACCTCTGCGAGGCCGCCCTCCGCACTGTCCTTGCCGGCGGCGTCCTCACCGCGTTGCCGGAGGAGGTCATCATGCCAGTCTTAGACGACTCTTCCGCTTCTCATGCTGCTCTTCATTTCAACAACACAAGCTTATCAGAGGCGTCCAAGAGGCGCAGCGTTAGCGGTGTTTCAACGCCACCCGCTGTGTCAGTTGTTTCGGGAGAACCATCGGAGATGACCTTGATGAGCTTTGATGATGGCATTTGCAGTCACAACCAGAGAAAACTCTTGAATCTTTTCGTGTAA 588 0.551 MTRVGPHSEMSCNGCRVLRKGCSDMCPLRTCLHWIPSPQAQAHATLFLAKFFGRSDLFSFISSVPHNNRPELFQSLLYEACGRTINPVNGAVGLLSTGNWHLCEAALRTVLAGGVLTALPEEVIMPVLDDSSASHAALHFNNTSLSEASKRRSVSGVSTPPAVSVVSGEPSEMTLMSFDDGICSHNQRKLLNLFV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0786 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 10 195 - -
Amo08g0786 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 10 195 - -
Amo08g0786 195 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Amo08g0786 195 ProSiteProfiles LOB domain profile. 10 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0786 Amo-Chr8 13958366 13959420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0786 10 121 AS2 family AT3G49940 71.429 3.37e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo08g0786 LOB 7.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0786 - - adu:107461241 399.438