Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0784 ATGGTGGTTAGGAAAGTAGGGAAGTACGAGATAGGGAGGACGATTGGGGAAGGAACCTTCGCGAAGGTGAAGTTCGCTCAGAACACTGAGACCGGTGAGAGCGTCGCCATGAAAGTTCTTGACCGCGCCACAATCATCAAGCACAGCATGGTGGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTGAGGCATCCCTATGTTGTTCGCTTGCATGAGGTTCTAGCAAGCAGAACGAAGATTTATATCATATTGGAGTTCATTACAGGTGGTGAATTGTTCGATAAAATTATACATCATGGACGTCTTAGCGAGACTGAAGCTAGAAGATATTTCCAACAGCTTATTGATGGCGTAGATTATTGCCACAGCAAGGGAGTCTATCACAGAGATTTGAAGCCAGAGAATCTTTTACTTGATTCACAAGGCAATATAAAAATTTCAGATTTTGGTTTAAGCGCATTACCAGAACAGGGTGTGAGTCTCCTTCGGACAACTTGTGGCACTCCAAACTATGTAGCCCCCGAGGTACTCAGTCACAAGGGTTACAATGGTGCTGTGGCAGATGTTTGGTCCTGTGGGGTTATCCTCTATGTCCTATTGGCTGGATACCTTCCCTTTGATGAGCTTGATCTAACCACCTTATACAGTAAGATTAATAAAGCAGACTTTTCATGCCCTTCTTGGTTTCCTGTAGGGGCAAAATCATTGATATGTAGAATTTTGGACACAAATCCTGAAACGCGTATAACCATAGAACAAATAAGAAACGATGAATGGTTTCAGAGGGGCTACGTTCCAGTCAGCCTTCAGGAGCATGAAGATGTAAATCTGGATGACATAAATGCTGCTTTTGATGATGCCGAGGAAGAGAGAGATATTCGTCAAAGCCATAATGAGGACATGGGTCCCTTATTGCTTAATGCATTTGACTTGATCATTCTATCTCAAGGCTTAAACCTTGCATCAATGTTTGACAAGGGACAGGGCGCTCTTAAGCATCACACACGTTTTATATCTCAAAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCCCAATCAATGGGATTTAAGACGCATATTCGCAACTTTAAGATGAGAATAGAGGGTGTCTCAGCAAATAAAACATCTTTTTTCTCGGTTATTCTGGAGTTGGATACTAGAAAGCAAACGGTCATTCTCAACACTAAGACTTTGTTTGGAGGGAAGAAATTAAGTTAA 1233 0.4217 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRATIIKHSMVDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIIHHGRLSETEARRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSLLRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYVLLAGYLPFDELDLTTLYSKINKADFSCPSWFPVGAKSLICRILDTNPETRITIEQIRNDEWFQRGYVPVSLQEHEDVNLDDINAAFDDAEEERDIRQSHNEDMGPLLLNAFDLIILSQGLNLASMFDKGQGALKHHTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNFKMRIEGVSANKTSFFSVILELDTRKQTVILNTKTLFGGKKLS* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0784 410 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0784 410 Gene3D Transferase(Phosphotransferase) domain 1 3 306 - -
Amo08g0784 410 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0784 410 PANTHER - 2 395 - -
Amo08g0784 410 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 395 - -
Amo08g0784 410 SUPERFAMILY Protein kinase-like (PK-like) 6 278 IPR011009 -
Amo08g0784 410 Pfam NAF domain 306 363 IPR004041 GO:0007165
Amo08g0784 410 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Amo08g0784 410 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Amo08g0784 410 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0784 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Amo08g0784 410 CDD CIPK_C 309 388 - -
Amo08g0784 410 Gene3D Kinase associated domain 1, KA1 307 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0784 Amo-Chr8 13932178 13939465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0784 1 409 CBL-interacting serine-threonine protein kinases AT4G24400 77.831 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo08g0784 Pkinase 3.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0784 - - gmx:100785444 703.36