Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0766 ATGGGTTCAGAGGCCACAGAGCAATCTTCTGAGAGGTCTCAATGGGTGCTCAATTCTCCCAAYCCACCACCTCTAACCAAGAAGCTTTTTGGTCCTCTGAAGAACAGTAACAACTTCTTTTTCTCTTCATCCTCATCCAAGAAGGAAACTCGCAGCSGACGCGCCGTTTCCTTCTTGGCGAGTTTGTTCCCAATCCTTAGCTGGTTCAGAACTTACTCAGCTACCAAGTTCAAGGATGATTTGCTATCTGGTTTAACTCTTGCCAGCCTCAGCATACCCCAGAGCATAGGATATGCAAATTTGGCCAAACTTGATCCTCAATATGGCCTGTACACTAGTGTCATTCCTCCTGTTATCTACGCACTAATGGGGAGTTCAAGAGAAATTGCTATTGGACCTGTGGCGGTTGTGTCAATGCTGCTATCTTCTCTGGTTCCAAAAGTGGTAGATCCTGATGCTCACCCAATTGACTACAGAAACCTTGTCTTTACAGTCACTTTGTTTGCCGGAATCTTTCAAACTGCGTTCGGAGTTCTAAGGTTGGGATTTCTAGTGGATTTTCTTTCACATGCTGCACTTGTGGGATTCATGGCAGGTGCAGCCATTGTTATTGGTCTTCAGCAGCTCAAGGGGTTGTTGGGGCTMACTCACTTCACTACCAAAACCGATGCAGTAGCAGTCTTGAAATCTGTTTATGCTTCACTCCATCAACAAATTACATCCTCAGAAAAATGGTCCCCTCTTAACTTTGTCATCGGGTGTTCATTCCTGATTTTCCTTTTGACTGCACGGTTTATTGGCAGAAGGAACAAGAAACTTTTCTGGCTGCCAGCTATTGCTCCTCTTCTATCGGTTATTCTGTCAACTTTGATTGTTTTCTTGTCMAAAGCTGATAAGCATGGGGTTAATATAATAAAGCATGTTCAAGGAGGGCTTAATCCAAGTTCAGTTCACAAGTTACAATTAAAAGGCCCACATGTTGGACAAGCTGCTAAAATTGGATTGATTTCTGCCATCATCGCTCTCACCGAAGCAATAGCTGTTGGTAGATCTTTTGCTAACATCAAAGGATACCATCTTGATGGGAACAAAGAAATGTTGGCAATGGGCTGCATGAACATTGCAGGATCATTAACTTCATGCTACGTGTCAACTGGTTCGTTTTCAAGGACAGCGGTGAATTTCAGTGCAGGGTGCCAAACAGCAGTTTCAAACATAGTGATGGCGGTAACGGTGCTTCTATGCTTGGAATTTTTTACAAGACTATTGTACTAYACTCCAATGGCAATACTTGCTTCTATAATCCTCTCAGCATTGCCTGGGTTGATAGACATTGGTGAAGCTTATCACATATGGAAGGTTGATAAATTCGACTTTCTTGCATGTCTTGGTGCTTTCTTCGGAGTCTTGTTTGTATCCGTTGAGATTGGTCTTCTTATTGCTGTTTCAATCTCATTTGCAAAGATACTATTACAATCAATTAGACCAGGTGTTGAAATTCTAGGGAGAATTCCAACCACAGAAGCTTATTGCGATGTTATCCAGTATCCCATGGCCATAACCACTCCTGGGATACTGGTCATTCGCATAAGCTCAGGCTCACTCTGCTTTGCGAATGCCGGTTTTGTCAGAGAAAGAATCCTGAAGTGGGTAGAGGATGAAGAACAAGATAACATTGAAGAAGCTGCTAAAGGAAGGTTGCAAGCTATAATCATTGACATGACCGACCTCACAAATGTTGATACTTCCGGAATCTTAGCACTGGAGGAACTGCATAAGAGATTGCTTTCACGTGGTGTAGAATTGGCTATGGTAAATCCAAGGTGGGTAGTGATTCACAAGCTTAAAGTGGCAAACTTTGTTGATAAAATTGGAAAAGAAAGGATTTTTCTTACTGTTGCTGAAGCCGTAGATGCTTGTCTCTCTTCTAGATTTGTCAACACTGCTTGA 1950 0.4246 MGSEATEQSSERSQWVLNSPNPPPLTKKLFGPLKNSNNFFFSSSSSKKETRSXRAVSFLASLFPILSWFRTYSATKFKDDLLSGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPVIYALMGSSREIAIGPVAVVSMLLSSLVPKVVDPDAHPIDYRNLVFTVTLFAGIFQTAFGVLRLGFLVDFLSHAALVGFMAGAAIVIGLQQLKGLLGLTHFTTKTDAVAVLKSVYASLHQQITSSEKWSPLNFVIGCSFLIFLLTARFIGRRNKKLFWLPAIAPLLSVILSTLIVFLSKADKHGVNIIKHVQGGLNPSSVHKLQLKGPHVGQAAKIGLISAIIALTEAIAVGRSFANIKGYHLDGNKEMLAMGCMNIAGSLTSCYVSTGSFSRTAVNFSAGCQTAVSNIVMAVTVLLCLEFFTRLLYYTPMAILASIILSALPGLIDIGEAYHIWKVDKFDFLACLGAFFGVLFVSVEIGLLIAVSISFAKILLQSIRPGVEILGRIPTTEAYCDVIQYPMAITTPGILVIRISSGSLCFANAGFVRERILKWVEDEEQDNIEEAAKGRLQAIIIDMTDLTNVDTSGILALEELHKRLLSRGVELAMVNPRWVVIHKLKVANFVDKIGKERIFLTVAEAVDACLSSRFVNTA* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0766 649 MobiDBLite consensus disorder prediction 1 24 - -
Amo08g0766 649 Pfam Sulfate permease family 77 463 IPR011547 GO:0016021
Amo08g0766 649 TIGRFAM sulP: sulfate permease 64 636 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo08g0766 649 Gene3D STAS domain 495 643 IPR036513 -
Amo08g0766 649 ProSiteProfiles STAS domain profile. 532 640 IPR002645 -
Amo08g0766 649 CDD STAS_SulP_like_sulfate_transporter 516 633 - -
Amo08g0766 649 PANTHER SULFATE TRANSPORTER 7 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo08g0766 649 ProSitePatterns SLC26A transporters signature. 106 127 IPR018045 GO:0008271|GO:0008272
Amo08g0766 649 MobiDBLite consensus disorder prediction 1 21 - -
Amo08g0766 649 Pfam STAS domain 516 636 IPR002645 -
Amo08g0766 649 PANTHER SLC26A/SULP TRANSPORTER-RELATED 7 647 - -
Amo08g0766 649 SUPERFAMILY SpoIIaa-like 520 640 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0766 Amo-Chr8 13551129 13556988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0766 3 641 Inorganic Solute Cotransporters AT5G10180 63.043 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0766 K17469 - gmx:100805269 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0766 08 13551129 13556988 Amo17g2797 17 129516039 129519766 hybridization