Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0730 ATGCATCATCTACCTCCATTTTTTAATTCCAGTAATAGAAATCAACGCAGCAACAACAATTCCATGGATTCAAAGAAGCTCCGAAGGAAGCCCAAGCTCGAGCGCCGCAATGCCGTCAAGTACGTTGACTACGACGCCGACGGCTCCACCACCTCCTCACACGATGATTCCTCTTCCTCCGTCGGTGGCGGAAGCAGAAGCGATTCCATTTACACCCGATCCATGGATTTCTACGACCGAACTAGCTTCCGAATTGAGGGAACCGAGGGCGAGTTTGACCGGATTTGCCGGAGCTTGGGGCTCTCCGGCCCGGAGGACTTCGCCATACCGGCGGCGGCCTGGGAAGCCATGAAGGTCCGGTCGTCATCGGATATTCTCCCGAGGCTGAATCCGAGGGAAGAGCGAGTGCCACCGCGGCGGAGCGACGTCGTTGCGGTGGGTGAATTGGCCAAGGAATTCGAAGGTGGAGCTAGGGTTAGGGTTGATGAGACCGGTGGTTGCTGCGCGGAGAGCTCCAGTGGCATATGCGGAGGAATCAAAGGTGTTCGTCCGCCGATGCTTAGGCCGCCGCCGGGGACCAAGGTGCCTGTGGTGGACAACACAAGCTCCACTTGGGACCTTCTAAGGGACTTTGCTCCAGAAGGTTCAGACAACGGCCACTTACTACAGATAGAACCAGATAAAGAAGACGAAGAAGAAGAAGAAAAGCAAGTAGTAGTGGTGGAGGAAGGAGGAGGTAAGAGAGAAGAGGAGGTGGAAGAAAGGGTGGATAATGCGGCGAGGATTGCGGAGATTGTTGCTGATCTTTCGGGGTCGTGTGGTTTTAGCACTTCAAATGAGGAAGATGATACTTCAAGCACTACCACGGGTCCAAGGTCTAACAATATATCTCCCAATGGAAGAATCAAGTGTATTATTACCTCTGGCGATTGGCAAAAGGGTGAGCTTCTTGGACGTGGTTCCTTTGGCTCAGTCTATGAAGGAATTTCTGGAGATGGAGTCTTTTTTGCTGTGAAAGAGGTTTCACTGCTTGATCAAGATAATCAGGGAAAGCAAAGTATCTATCAACTGGAGCAGGAGATAGCACTTTTGAGTCAGTTTGAACATGAGAACATAGTTCAATACTATGGCACAGAAACGGATGAATCAAAGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCTCTTGCAAGCCTTTATCGCAGGTATACACTTCGAGATTCCCAAGTCTCTGCCTACACAAGACAGATTCTGCATGGCTTGAAGTATCTTCATGATCGAAATGTGCTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTAAAGCTTGCTGATTTTGGATTGGCAAAGGCAACCAAATTGAATGACATTAAATCATGCAGGGGGACACCATTGTGGATGGCTCCTGAGGTTGTGAAAGGAAAGAACCAAGGTTATGGGCTTCCAGCTGATATGTGGAGTTTGGGATGCACTGTACTAGAAATGTTAACAGGCAAACTTCCATATTCGGAGTTTGAAAGTATGCAGGCATTATATAGAATTGGGAAAGGTGAGCGTCCTTCTATGCCTGATTCTCTTTCAAAGGATGCTCGAGACTTTATCCTGCAGTGCCTTCAAGTTAATCCAGATCACCGTCCCACTGCTGCCCAACTCTTGAGCCATCCATTTATCCAAAGACCAGTTTCCCACTCGTCGGGCTCATTTCCTAATCTTCCAGGCAAAAAAGGTTAA 1752 0.4834 MHHLPPFFNSSNRNQRSNNNSMDSKKLRRKPKLERRNAVKYVDYDADGSTTSSHDDSSSSVGGGSRSDSIYTRSMDFYDRTSFRIEGTEGEFDRICRSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLNPREERVPPRRSDVVAVGELAKEFEGGARVRVDETGGCCAESSSGICGGIKGVRPPMLRPPPGTKVPVVDNTSSTWDLLRDFAPEGSDNGHLLQIEPDKEDEEEEEKQVVVVEEGGGKREEEVEERVDNAARIAEIVADLSGSCGFSTSNEEDDTSSTTTGPRSNNISPNGRIKCIITSGDWQKGELLGRGSFGSVYEGISGDGVFFAVKEVSLLDQDNQGKQSIYQLEQEIALLSQFEHENIVQYYGTETDESKLYIFLELVTKGSLASLYRRYTLRDSQVSAYTRQILHGLKYLHDRNVLHRDIKCANILVDANGSVKLADFGLAKATKLNDIKSCRGTPLWMAPEVVKGKNQGYGLPADMWSLGCTVLEMLTGKLPYSEFESMQALYRIGKGERPSMPDSLSKDARDFILQCLQVNPDHRPTAAQLLSHPFIQRPVSHSSGSFPNLPGKKG* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0730 583 MobiDBLite consensus disorder prediction 1 67 - -
Amo08g0730 583 MobiDBLite consensus disorder prediction 273 299 - -
Amo08g0730 583 MobiDBLite consensus disorder prediction 46 67 - -
Amo08g0730 583 MobiDBLite consensus disorder prediction 7 21 - -
Amo08g0730 583 Pfam Protein kinase domain 312 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0730 583 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 78 577 - -
Amo08g0730 583 ProSiteProfiles Protein kinase domain profile. 311 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0730 583 MobiDBLite consensus disorder prediction 239 253 - -
Amo08g0730 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Amo08g0730 583 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Amo08g0730 583 SUPERFAMILY Protein kinase-like (PK-like) 309 567 IPR011009 -
Amo08g0730 583 SMART serkin_6 311 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0730 583 Gene3D Transferase(Phosphotransferase) domain 1 308 575 - -
Amo08g0730 583 MobiDBLite consensus disorder prediction 227 253 - -
Amo08g0730 583 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 78 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0730 Amo-Chr8 12979277 12985140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0730 13 568 MAP Kinase Kinase Kinase AT4G08500 47.308 3.37e-166 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo08g0730 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0730 K13414 - gmx:100819999 726.472