Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo08g0705 | ATGAAACCTTCCATAATATCTTCCTCTCTTCTAATCATCTTCCTCGTCTTCACTGCCACTGCCACCATCTCAGGCTACACCTTCAAGGCCTACATCACTCCAAATTTCAGTGCCACATACCTCCAATTCATTGATGACTCTGGAACCTTCTTAATATCTCCAAACGGAACATTCAAGGCTGCAATATTCAACCCGGGTTCCCAACAAACCAGCTTCTATCTCTGCATAATCCATGCTGCATCAAGAACCATCACTTGGTCCGCCAACCGCGGCCGCGCCATCTCGAGCTCCGGCCAGATGAATCTAACTGCTAAAGGGATAACAATTTCTGATGAAAGTGGAAGGAATAATCCTGTATGGTCAACTCCACCATTGAGATCACAAGTTGRTAGGCTTGTCCTCACTGACATGGGTAACCTCCTACTCCTTGATCCTTCCAATGTTTCTCTTTGGGAAAGTTTTCGCTATCCAACCGACACAATTATCATCGGCCAGAGCTTACCTGTTGGATCATCTTTGTCAAGTTCTTCATCAGATTCAGACTTGTCCATTGGAARCTACAACCTCACAATCACTTCCTCTGATGCAATTCTCCAATGGCTTGGACAGACATATTGGAAACTTTCAATGGACACAAAGGCGTATAAGAATTCATTAAGCATGGTGGAGTACATGGCTGTGAACAGAACAGGCTTCTACCTATTTGGAAGTAATGGAACGGTTGCTGTGTTTCTGGTAGGCTTACCGGAGTCGAATTTTCGAGTAGCTACATTGGATAACTCTGGCCATTTTGTGATCAAAAGTTTTTCTTCCGGAACCGGTTGGAAGCAGGAATTTCAAGGGCCAGATGATGGTTGTGGAACTCCCTTAGTTTGTGGCAGAGTTGGTTTATGCAATGATGATGATACCTCTTCTTCATCTTCTTCTTCTTCATCATCATCATCACCTGTTTGTTCTTGTCCCCAGAATTTTCATGTAGGTTCAGGTAATTCTGGTGGTTGTGTTCCAAGCAACGGTTCTTAYTCCTTTCCATATTCTTGTGATGTTTCTAATAATGATAGTTACCACAACAACAACAACCAATCAAATTCTGCTTCTTCCATTGTTTCATTCTTGAATCTTGGAAATGGTTTGGACTACTTTAACAATATCTACACCGATCCTGTTATGGACAGTGTGGATTTATCATTATGTCAAGACCAATGTTCCAAGAATTGTTCATGCTTGGGAGTCTTCTATAAAAACTCATCCGGTTCATGCTATGTGATTGAAAACGAGTTGGGGTCAATTTTGTCAAGTAACGATGGAGCCAATCAAGACATGTTTGGCTTCATCAAGGTYTCTATAGGATCCACAACCACCAATGATGATACGAGAGATGYTGAAGATGGCGGAGGAGGCTTTCCGGTGGTGGCCRCAGTGTTGTTGCCGATCACAGGCTTCGCTCTCTTGATGGCCTTTCTTTTCTTCTTGTGGAGAAGATCTATTAAAATTTCCAAAAGAAAACAAGATTTGGAACTCGGAAAACCCAACAATAATCCTCATTCTTCCGGGGACCTTGATGCCTTCTACATCCCGGGTTTGCCTCGAAGATTCGACTACGACGAACTCAAAAAGGCCACCGATGATTTCAAGACTCTGATCGGCTCCGGTGGTTTTGGTACGGTGTACAAAGGAGTTCTCTCCGACAATGCCGTCGTGGCGGTCAAGAAAATAGTCAACATAGGAGTTCAAGGGAAGAAAGACTTTTGCACAGAGATTGCTGTCATTGGAAACATCCATCATGTCAATCTTGTCAAATTAAAAGGCTTTTGTGTCCAAGGGAGGCATCGGTTTTTGGTGTATGAGTACATGAATCTTGGTTCCCTCGACCGAACGTTGTTCGGTGGAGGGCCACCGTTGGAGTGGCAAGAGAGATATGACGTGGCATTGGGGACGGCGCGTGGTCTTGCCTACCTTCATGGTGGGTGTGAGCATAAAATTATTCACTGCGATATCAAACCTGAAAATATTCTTTTACATAATCATTTTCAAGTTAAGATATCGGATTTTGGATTATCAAAACTTTTAAGTCCTGAACAATCTGGATTGTTCACAACAATGCGAGGTACACGTGGATACCTCGCTCCAGAATGGCTCACAAATTCCGCCATCACAGAAAAAACTGATGTGTATAGTTACGGTATGGTTCTTCTCGAACTTATAAGCGGAAGAAAAAATTGTTATTTTAAATCAAGAAATCATAGTATAGACGAGGATAGTAATTCTTCGTCATCTTCGACGTCAGGATTGCTTTATTTCCCTTTGTTGGCATTGGAAAAGCATGAAGAAGGGAACTACATGGATCTTGCTGATCCGAGATTAGAAGGGCGCGTGACGAACGAAGAGGTGGAGAAGCTTGTGCGGATTGCGTTGTGCTGTGTTCATGAAGAACCGGCGTTGAGGCCGAACATGGCGGCGGTTGTTGGGATGTTGGAAGGTGGTATGGCATTGCCGCAACCAAAGATGGAGTCTTTGAACTTTTTAAGGTTTTATGGTCGTAGGTTTACGGAGGCTTCAATGATAATTGAGGAGAATAACGATAACGAAGGAGGAAGAAGAGAAGTGAATAATAATTCTTCAAGCATGACAAGTGGTGGCTCTCAAGCTGCTTTAGTTTCTTACATATCTTCACAGACTGTCTCAGGACCAAGATAG | 2697 | 0.4301 | MKPSIISSSLLIIFLVFTATATISGYTFKAYITPNFSATYLQFIDDSGTFLISPNGTFKAAIFNPGSQQTSFYLCIIHAASRTITWSANRGRAISSSGQMNLTAKGITISDESGRNNPVWSTPPLRSQVXRLVLTDMGNLLLLDPSNVSLWESFRYPTDTIIIGQSLPVGSSLSSSSSDSDLSIGXYNLTITSSDAILQWLGQTYWKLSMDTKAYKNSLSMVEYMAVNRTGFYLFGSNGTVAVFLVGLPESNFRVATLDNSGHFVIKSFSSGTGWKQEFQGPDDGCGTPLVCGRVGLCNDDDTSSSSSSSSSSSSPVCSCPQNFHVGSGNSGGCVPSNGSYSFPYSCDVSNNDSYHNNNNQSNSASSIVSFLNLGNGLDYFNNIYTDPVMDSVDLSLCQDQCSKNCSCLGVFYKNSSGSCYVIENELGSILSSNDGANQDMFGFIKVSIGSTTTNDDTRDXEDGGGGFPVVAXVLLPITGFALLMAFLFFLWRRSIKISKRKQDLELGKPNNNPHSSGDLDAFYIPGLPRRFDYDELKKATDDFKTLIGSGGFGTVYKGVLSDNAVVAVKKIVNIGVQGKKDFCTEIAVIGNIHHVNLVKLKGFCVQGRHRFLVYEYMNLGSLDRTLFGGGPPLEWQERYDVALGTARGLAYLHGGCEHKIIHCDIKPENILLHNHFQVKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSYGMVLLELISGRKNCYFKSRNHSIDEDSNSSSSSTSGLLYFPLLALEKHEEGNYMDLADPRLEGRVTNEEVEKLVRIALCCVHEEPALRPNMAAVVGMLEGGMALPQPKMESLNFLRFYGRRFTEASMIIEENNDNEGGRREVNNNSSSMTSGGSQAALVSYISSQTVSGPR* | 899 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo08g0705 | 898 | ProSiteProfiles | Bulb-type lectin domain profile. | 35 | 155 | IPR001480 | - | |
Amo08g0705 | 898 | SMART | blect_4 | 42 | 157 | IPR001480 | - | |
Amo08g0705 | 898 | SUPERFAMILY | Protein kinase-like (PK-like) | 520 | 825 | IPR011009 | - | |
Amo08g0705 | 898 | MobiDBLite | consensus disorder prediction | 866 | 884 | - | - | |
Amo08g0705 | 898 | SMART | serkin_6 | 542 | 825 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo08g0705 | 898 | Gene3D | Transferase(Phosphotransferase) domain 1 | 618 | 836 | - | - | |
Amo08g0705 | 898 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 661 | 673 | IPR008271 | GO:0004672|GO:0006468 | |
Amo08g0705 | 898 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 11 | 898 | - | - | |
Amo08g0705 | 898 | Pfam | D-mannose binding lectin | 83 | 168 | IPR001480 | - | |
Amo08g0705 | 898 | PIRSF | SRK | 4 | 882 | IPR024171 | GO:0004674 | |
Amo08g0705 | 898 | ProSitePatterns | Protein kinases ATP-binding region signature. | 548 | 571 | IPR017441 | GO:0005524 | |
Amo08g0705 | 898 | ProSiteProfiles | Protein kinase domain profile. | 542 | 836 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo08g0705 | 898 | Gene3D | - | 42 | 155 | IPR036426 | - | |
Amo08g0705 | 898 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 74 | 208 | IPR036426 | - | |
Amo08g0705 | 898 | Gene3D | Phosphorylase Kinase; domain 1 | 521 | 617 | - | - | |
Amo08g0705 | 898 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE | 11 | 898 | - | - | |
Amo08g0705 | 898 | CDD | B_lectin | 47 | 157 | IPR001480 | - | |
Amo08g0705 | 898 | MobiDBLite | consensus disorder prediction | 858 | 884 | - | - | |
Amo08g0705 | 898 | Pfam | Protein kinase domain | 545 | 819 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo08g0705 | 898 | CDD | STKc_IRAK | 548 | 827 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo08g0705 | Amo-Chr8 | 12532194 | 12535001 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo08g0705 | 525 | 834 | Receptor kinase-like Gene Family | AT5G20050 | 43.653 | 1.88e-76 | 255 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Amo08g0705 | Pkinase | 3.5e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo08g0705 | - | - | ahf:112766506 | 1634 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo08g0705 | 08 | 12532194 | 12535001 | Amo17g2769 | 17 | 128946347 | 128949252 | hybridization |