Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0691 ATGGATCCCTACTTTCATCACTACCGTCGCCCGAATACGTACATTCCTCTTCCTCCATCGTATAACCACCACCATCTCCGTCAGGTTCCCAACCACGTTCTTGTGAACCCTACAGCATTCAATTTCAACCCTCCCGTTTTTTTACCCGCCAATCCACTCTTTGTTCCTCAGGTTCCTGTTCTTTTCGACCATGATTCGCGTCACCGTCGTTCAATGCTGTCGCAGTCTCCTTCAAATTCTAACCCTAGCCGCAGTGCTTCCAGGTTCAGTAAGGAGTGCTTTGGCGGAGCAAACCGCCGTTGCCGTGCGGTTGTTCCTCTGAATTCCGGTACCGAATCGAAACTTTGCTCGGAAGAGGCGCAAGACTCTTCTCTCGAGACTACGGCTTTGGAACTGGATAGGTACGATTACGATAGAGCAGATAAGGTTCATGAATATACTGGCATTCCAAAGAAACAGGTTAAGAGAAAGAGTGCTTTTCTTAGAATCCAGGCGCCAAAACCGAGCAATGGTAAGAATGAGGATGATGAACAATTACATTGTGATGATTGTGCTGTTGTTGACTCAAAACCTGGTTCTAGTTCTTCGAGAATTGAAGACGAGCATTGTTTGAATGATGGGAAGCAAGCAGAAGTGGGAGAAGAAATTCCTTTTGGGGTTGATGTTTTCTTTGAATCGAATTCTATGGTTGCCAAGGCTATTGTGGGGTCTTCCAGTTCTTCCTTTGTTTCTAATCCTGGAACCACTGCAGTTTCTAATACAGCTTTGAGTCCTATTGGAAAGGCAAAGAAAAAGAAAAAGAAGGCTAAAAAAAGGAAGTGTTTGGTTTCTGAAATTTCTTGTTCTGATGCACATAGAGTTTCAGAACTACCAGCAAGTGCTGCCCAATCAAATAGTTCCCAGCACCTGGCAAACGACATCTCTATTTCTGGAAAGGACTTGACTGCACGGAAGGATGTGTCTTTGGTTTCTGAAATTTCTTGTTTGGGTACACATCAAGTAGAACTATCTGCCGACGGTTCTGTAAATTCTCATAGCTCTCAGTGTTTGGCAAATGGCACCTCGAGTTCTGGTGAGGACTTGCTTGCACAGACGAATGCATCCTTGGTTTCTAAAAGTGGTTGTTCTGATTCACAGCTAGTAAAACTGTCTGCAGTGAATTCTATGGTTGCCAAGGCTATTGTGGTGCCTTCAAATTCTACCATTGCTTCTAATGCTGAAACAACTGCTGTTTTGAAGACAGATTTGAATCCTAATCAAAAAGGGAAAAAGGCTAAACGAAAGTCTAAAAAAAGAAAGCAATTGGTTTCTGAAAGTTGTTGTTATGAATCAAAGCGAATAAAACTAACTGAAGGTGCTGCCAATTCAAATAGCTCACACTGCTTGTCATATAACACCTCTTGTTCTGGGAAGGACTTGACTTCACAGAAGAGCGTAGCTTTGGGTTTACAGCAAGCAGAACAATTTGCTGGTTCTGGAAATTCACATAGCTCCCAATGCTTGCCAAATGACACCTCTAATTTTAGTAAGGACTTGATCACAGAGGTGAATGTATCTTTGTTTTCCAAAGATTCTTGCTCAGAATCACAGCTTGTAAAACTATCCGAGTTTGCTGGGATTTCAAATAGTTCAGAGTGCTTGGTAAATGGCACCTCTAATTCTGGGAAGGATTTAAGGGCAAAGAAGAATGTATCTGATTGCTTTTCTCATCTTCATCCGAGTGCAGTCCAAAATCCTAATGGAAAAACTAAGGTGGCACAATCCTCTAAGGGGATTGTAACAGAAGAAGTTGCCAATACAATTTCCGGTAAAGCAACTCCAAGGGTTGTTAAGAAGAAAAAGATTGTTAAAAGAGTGGTCAAAAAGGTTGTGAAACCAAAATCAAGTAGGTCAAGTTCAATATCAGCAAATATGTTTGATGGGATAGTGAAAGAAGATAATGTTCCTGTTAGTTCATTAACTGCTGCTGCTCCTTTGGACAAGATCCCAACGACTTCTTTTGAGGAAAAGACTGCCCCTGTTGACAAGATGTCAGTTCCAGATTATTTCCAGTCTTTACCAAGTGAAGGAAATTTGTTGCTTGAAGACAAAAATGCTGTTGTACACCTTGAAGAAAAGCATACTGAATTATTCAATGGAAATACTTCTGACATTAATCACATTGAGGCTTATAGTAAGCAATCATGCCAACATGAAAAGGAGAACTGTGACATACAATCAGTTCCAAATTCTGATATTTCCATTGATTGTGTTAAAGGGGACACAGGTACTGTTGAAGAGAGAGAGGTTAGAACTCTCTTAAAATTTTCTCCTTCAAAGATGGAGGGCATGTCTCTAGATGCAGAAAATCCAGTTGGTCTTGCAAATGTTGTCTACACAACCTCAGATCTGTTGAAGGTTCCTAGTCTTTCAGAAGCCTTAGATATATCTGTTCCAATGTTAGATTTTGGCTCACAATCCAGAACAGATGGGATCACAACTTTAACTGTGAAAAGGGGGATTTCTGTGGCTGATTTATATGAGGATGCAAACAAGATTTCACCCTTGTACAAAAGGCGCAGAACCACAGCTTGTCACTCTAGTATCACTGAGTGTCCATCTGAACTCAGTGATGTGATTGTGGCTTCCACCACATCTTGTGCAGAAGTCCCTATTCACTTTAGTGATATGCAAATACATAAGGAAGAAGTTGAATTGCTAAGCATGGCTGTTATGTCTACTCCGTTGCTGACTTATACAGAGGATATTGCTAAATTGTCTGACATTAGCTTGGGTAGAGATTCTTTTGAGTCTATGAATTTAAATAGGGAAAGAGATTCTCCCAAGAGTTTGGAATTGCAGCACTCAGGCATTGCCTCTAATTCTCTTCTTGAATACTCAGCCACTCCAAATGTTCATTTTCCAATGTTGGAAGGTGAACCGAAAGAAAATGCCACTTCAGTTGTGCCAATCAGTACGGAGACAAGCATTTTGGCTGTTGAAAATGTTCAGGGAGAAAAAATTAATTTACAGGACGTTGGGGGAAATCATCAGAAGAGAGTTTGTGTGCAAAGATCTCCAGATTGTGTCATTCCTAAAACTTCAAAGGACCAGTCCTCCTTTTTTCCCCGATCAAAGCCATTTACTTCATCCCGTTCATTAAAACCTCGAACCTGGCTTCGAACAGGTAATAATTATCCTGGTTCTTTTTCTGGAAGCAAGCCTTCGTTGATAACTAGTCCTCCTAACAAGTTAATTCCACAAATGAAAGGGAACACTCAAAATACTCTTTATACCCGTAAGGGTAACAGTCTTGTTCGGAAAGTTATCCCTGTTTCTGCTTCAACATCAACATCCGTTGCTAACCAGTCACCATCTTTGGGCTTTGACAACTTTGGAAAGAGCATCAGATCTGAATGCATGGTTAATGTTCCAGGTCAACCAGGTGCTTTGAAAACTGGAGTAAATGATGTTCCTTTGAAGGGTCACATAATACTTCCACTACCCACTGACACCAAATTGGAGAGTGGATCTTCCCCATTTACAGAGAATCTTACACTTGGTTGCTCTGAATTTGCAGCTGATCCTAAGAATGTTGGAGAAACTAATGATGCCGCAAAATCTTATGAGGAATTGTGCAAATATTCTGAAACATACGAAAATCAAATTGGTTCAGACAATCGTGGGGCTGGCCAAGTTGAGATTTCTTCTTCAATTGCAAAGAGAATAGTATATATGAAGCCCAAGTCAAATAAATTAGTTGCATCTTTGGATTCTAGTAATCTCTCTGTCTCTACTGATGGCAAGACTCAAACAGCATACTCCAATGGCTACTACAAGAAGAGCAAAAATCAGATAATAAGGACTTCATTTGTTAGTCATATCAGCCCAACAGTTACAATGCAAGATAGTAATGTAAATTCTGATGGTCCATCGGATTCTAAAGAGATTTGCAGCAGGTTTACAAAGAAGTGGTCGCAAAAAGTTGCTGGGACCTTGTGCAAACCTTTAAAAGCCCCACTTGTTGGGACCCTTTCATCAAAAAACAACACTGGCTCAGGGCATTATCGGAAGATTTTGCCTCACTTTTTTCAATGGAAAAGATCAACATTTCGAAGAAGATTTGTTCACAATCGTGATTTAAGCTCCAATTCTACTCCCTCATCAGCAAACAGCAAGAAATTGCTTCTTTTAAGGAAGAGGGATGCTGTTTACACTAGATCAACCCATGGGTTTTCTCATTGGAAACCTAAGGTATTACATGCTGGTGGATCCATAAAAGGGTCCAAATTTGCTGGCAGGCACTCTGAGAAGGTTAATGAGGAAGCACTTGCTGTTGCTGTGTTGGAGAGGAAAACAAGAGAACAGAAAGATGTTGCTTGTAACAGTTCTCAGGCAAAAGGCTTGGCTGCCAAAGAAGGTTCCATCCAACGAAGATTAGTGATTGGGGAAAATGTTTTCATTTGTCCTCCAGCATTTGAGACTTTGAGTATTGAAACTATTACTTTCATTGCTGCAAGGTATTTCCAAATTGGCAAAGGTAATCAGCTTATTAGGGACCCAAAGAATCGGACTCGGATTTTGGCTAATGAAAAAGTTAGATGGAGTCTGCACACTGCTAGACAGCGCCTTGCACGAAAGCAGAAGTACTGTCAGTTTTTTACCAGATTTGGGAAATGTAACAAGGATGATGGGAAGTGTCCTTATATTCATGATCCCTCAAAAGTTGTTGTCTGCACTAAGTTTCTAAATGGTTTATGTTCTAATGGCAACTGCAAATTGACTCATAAGGTTATTCCGGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGTTTATGCACAAACAGAAGTTGTCCTTACAGACATGTCAATGTGAATCCTAAGGCTTCTATTTGTGGAGAATTTCTCAGGGGCTATTGTGCCGATGGAAATGAGTGTCGGAAGAAGCATAGCTATGTCTGTCCAACCTTCGAAGCAATGGGAAACTGCGAAGAAGGAACCAAATGCAAGCTTCATCACCCGAAGAAACTGAGTAAGGAAAAGAAAAGGAAGAGGTCCAGAGATGAGAATGTTGGTAGACGGCGTTACTTTGGTTCCGTTCTCACTGATATCAAAGAAACTGGGTTAATGGTGGCTCAAAGGCAATGGCAACAGAGTCATGACAAAGACGGAGATGTTGCTGACTATATCGGCTTCGAAGTTGAAGAAAGTGTTGATCAACCATATGAACAGGCAACACCATGTAACAATGATATTTGGGACTTGCAATTGGACAATCTTGATGAACCTATTAGACCTGTTCTTACGTTGAAAAACATTTTTATGGCTCAATCATCTTCAGTCTAG 5328 0.4071 MDPYFHHYRRPNTYIPLPPSYNHHHLRQVPNHVLVNPTAFNFNPPVFLPANPLFVPQVPVLFDHDSRHRRSMLSQSPSNSNPSRSASRFSKECFGGANRRCRAVVPLNSGTESKLCSEEAQDSSLETTALELDRYDYDRADKVHEYTGIPKKQVKRKSAFLRIQAPKPSNGKNEDDEQLHCDDCAVVDSKPGSSSSRIEDEHCLNDGKQAEVGEEIPFGVDVFFESNSMVAKAIVGSSSSSFVSNPGTTAVSNTALSPIGKAKKKKKKAKKRKCLVSEISCSDAHRVSELPASAAQSNSSQHLANDISISGKDLTARKDVSLVSEISCLGTHQVELSADGSVNSHSSQCLANGTSSSGEDLLAQTNASLVSKSGCSDSQLVKLSAVNSMVAKAIVVPSNSTIASNAETTAVLKTDLNPNQKGKKAKRKSKKRKQLVSESCCYESKRIKLTEGAANSNSSHCLSYNTSCSGKDLTSQKSVALGLQQAEQFAGSGNSHSSQCLPNDTSNFSKDLITEVNVSLFSKDSCSESQLVKLSEFAGISNSSECLVNGTSNSGKDLRAKKNVSDCFSHLHPSAVQNPNGKTKVAQSSKGIVTEEVANTISGKATPRVVKKKKIVKRVVKKVVKPKSSRSSSISANMFDGIVKEDNVPVSSLTAAAPLDKIPTTSFEEKTAPVDKMSVPDYFQSLPSEGNLLLEDKNAVVHLEEKHTELFNGNTSDINHIEAYSKQSCQHEKENCDIQSVPNSDISIDCVKGDTGTVEEREVRTLLKFSPSKMEGMSLDAENPVGLANVVYTTSDLLKVPSLSEALDISVPMLDFGSQSRTDGITTLTVKRGISVADLYEDANKISPLYKRRRTTACHSSITECPSELSDVIVASTTSCAEVPIHFSDMQIHKEEVELLSMAVMSTPLLTYTEDIAKLSDISLGRDSFESMNLNRERDSPKSLELQHSGIASNSLLEYSATPNVHFPMLEGEPKENATSVVPISTETSILAVENVQGEKINLQDVGGNHQKRVCVQRSPDCVIPKTSKDQSSFFPRSKPFTSSRSLKPRTWLRTGNNYPGSFSGSKPSLITSPPNKLIPQMKGNTQNTLYTRKGNSLVRKVIPVSASTSTSVANQSPSLGFDNFGKSIRSECMVNVPGQPGALKTGVNDVPLKGHIILPLPTDTKLESGSSPFTENLTLGCSEFAADPKNVGETNDAAKSYEELCKYSETYENQIGSDNRGAGQVEISSSIAKRIVYMKPKSNKLVASLDSSNLSVSTDGKTQTAYSNGYYKKSKNQIIRTSFVSHISPTVTMQDSNVNSDGPSDSKEICSRFTKKWSQKVAGTLCKPLKAPLVGTLSSKNNTGSGHYRKILPHFFQWKRSTFRRRFVHNRDLSSNSTPSSANSKKLLLLRKRDAVYTRSTHGFSHWKPKVLHAGGSIKGSKFAGRHSEKVNEEALAVAVLERKTREQKDVACNSSQAKGLAAKEGSIQRRLVIGENVFICPPAFETLSIETITFIAARYFQIGKGNQLIRDPKNRTRILANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDDGKCPYIHDPSKVVVCTKFLNGLCSNGNCKLTHKVIPERMPDCSYFLQGLCTNRSCPYRHVNVNPKASICGEFLRGYCADGNECRKKHSYVCPTFEAMGNCEEGTKCKLHHPKKLSKEKKRKRSRDENVGRRRYFGSVLTDIKETGLMVAQRQWQQSHDKDGDVADYIGFEVEESVDQPYEQATPCNNDIWDLQLDNLDEPIRPVLTLKNIFMAQSSSV* 1776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0691 1775 MobiDBLite consensus disorder prediction 72 88 - -
Amo08g0691 1775 Gene3D - 1621 1683 - -
Amo08g0691 1775 PANTHER CCCH ZINGC FINGER 385 1764 - -
Amo08g0691 1775 ProSiteProfiles Zinc finger C3H1-type profile. 1620 1647 IPR000571 GO:0046872
Amo08g0691 1775 MobiDBLite consensus disorder prediction 69 89 - -
Amo08g0691 1775 SMART c3hfinal6 1647 1669 IPR000571 GO:0046872
Amo08g0691 1775 SMART c3hfinal6 1620 1646 IPR000571 GO:0046872
Amo08g0691 1775 SMART c3hfinal6 1538 1566 IPR000571 GO:0046872
Amo08g0691 1775 SMART c3hfinal6 1593 1618 IPR000571 GO:0046872
Amo08g0691 1775 SMART c3hfinal6 1567 1591 IPR000571 GO:0046872
Amo08g0691 1775 MobiDBLite consensus disorder prediction 1027 1046 - -
Amo08g0691 1775 ProSiteProfiles Zinc finger C3H1-type profile. 1538 1567 IPR000571 GO:0046872
Amo08g0691 1775 ProSiteProfiles Zinc finger C3H1-type profile. 1593 1619 IPR000571 GO:0046872
Amo08g0691 1775 Gene3D - 1565 1620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0691 Amo-Chr8 12177534 12185012 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Amo08g0691 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0691 - - ahf:114924304 3294.98