Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0687 ATGATGACGTGTCCGGTGGAGGGAGGTGGCTCCGGCGGGAGGACGGTGGTGGTTGGGGTGAAATTGGATTCTCCGAGCAAGGAGCTTCTTACGTGGGCATTGGTCAAAGTTTCTCAGTCTGGTGATACTGTTGTTGCTCTGCATGTTCTTGATCAACATGAAATTGTGAATAAAGATGGGAAATCGTCGTTGCTTTCGCTTGTGAAGGCCTTTGATCCTGTTCTAGCTGTTTATGAAGGTTTCTGCAATTTGAAACAGGTGGATCTCAAGCTCAAAATTTGCCGTGGTTCATCAGTGAAGAAGATTTTGGTCAGGGAAGCCATTGCTTATTCTGCAACTCATCTTGTGCTGGGAACATGCCATGGTCACCATAAAATCCGGTCATCCACCTCTGTGGCTAAGTACTGTGCCAAGAAGTTGTCTAAGGACTGTTGTGTTCTTGCTGTTAACAATGGGAAAGTTGTCTTCAAGAGTGATGGCTTGCCGGATACGGCTGCCCCCGACTCACAAGGTCACAGAAATGGTTTGCTTGGTTCAATTCACTGGAAAATCAGTAAGAGTACAAAAGTGCTAAGTGATGAGAGTGCAGAGAGTGATGCTGGCAAGAGTACTGGCCAATTTTCCGATCACAGTTTGGCGAAGATTTTAATGGATACTACTGAGTTTGATAGAAAAGATAGCTGCTCGGTTTGTGATCCAATCCTGGCATTGCCGCCTCCAGACTCTTGCCACCAATCTGCAGAAGAAGAATCTTGCAGTGATCGTGGTTGTGATAATTCCTTGGCTATAGTGCCTGTTCCGACCATGGATGCCGCACCACCTGAATTGAAACCAGGCTGGCCACTACTTCACCAGAGAATCTCATCAGAAACTCAGTTTCCTGATAGACTATCGGCACGCCAGATCTCTGTGGTCCAGTGGGCAATGAGGTTGCCTAGTAGGAATCTTTCATATGCTTCGGATCAAGATCGTAAGCCTCAAGATGAATCTGTGCCTTTGGATAGTGAAACTGGTGCTGTTGTTCCAGTAGATTATGGAATAGTGACTGTTTCTTTGCCTGAACCGAACTCAAAAAGTATTCCTCTTGAATTGGCCAGCCTTCATGAGAAATACTCGTCAAGTTGCAGATTGTTCGAGTACCAAGAACTTGTATCAGCAACATCAAATTTCTTGCCTGAGAACTTGATTGGGAAAGGAGGAAGTAGTGAGGTTTATAGAGGGTGCCTTCCTGATGGACAGGAACTTGCAGTGAAGATCCTAAAGCCTTCTGATGAGGTTTTAAAGGAGTTTCTTCTTGAAATAGAAATTATCACTACCTTGAATCATAAAAACATTATATCTCTTCTTGGATTCTGCTTTGAGAATGGGAATCTTCTTCTTGTCTATGATTTATTATCAAGAGGAAGCCTTGAAGAAAACCTTCATGGAAGTAAGAAAAATTCTCTTGTGTTTGGTTGGAATGAGAGATATAAGGTTGCGATGGGTGTTGCCGAGGCTTTGGATTATCTGCACTGCAAAGGTGATCAGCCTGTGATCCATCGCGATGTAAAATCATCAAATGTATTATTATCTGAGGATTTTGAACCCAAGCTCTCTGATTTTGGACTTGCTAAATGGGCATCAACTTCATCATCACAGATAACTTGCACAGATGTTGCTGGAACCTTTGGCTACCTGGCTCCTGAATACTTCATGTATGGCAAAGTACATGATAAGATCGACGTCTATGCTTTCGGTGTCGTGCTCCTTGAGCTTCTTTCAGGAAGGAAGCCCATAAGTGGTGATTTTCCAAAAGGTCAAGAGAGTCTTATCATGTGGGCAAGTCCACTTCTAGATAGTGGAAAAGTGTTGCAACTGTTAGATCCCACTTTGGGCGATAACTATGATCATGAGGAGATGGAAAGAATGGTCTTAGCAGCCACACTTTGTTTAAGGCGTGCTCCGAGAGCTAGGCCTAAAATGAGCCTTATTTCTAAGCTCCTTCATGGTGATGCTGATGTAATCAAGTGGGCAAGGTCGGAAATTAATGTGAAGAAAGCACCGGAAATGCTTGAAGATGAAGCGTGTCCACCGAGCAACCTGCAGTCACATCTTAACCTTGCACTCCTTGATGTGGAAGATGACTTGCTCTCCATGTGTAGTGTCGAGCAGCACGTCTCTTTGGAGGACTACTTGAGAGGCCGGTGGAGCCGCTCCTCGAGCTTTGACTGA 2211 0.4455 MMTCPVEGGGSGGRTVVVGVKLDSPSKELLTWALVKVSQSGDTVVALHVLDQHEIVNKDGKSSLLSLVKAFDPVLAVYEGFCNLKQVDLKLKICRGSSVKKILVREAIAYSATHLVLGTCHGHHKIRSSTSVAKYCAKKLSKDCCVLAVNNGKVVFKSDGLPDTAAPDSQGHRNGLLGSIHWKISKSTKVLSDESAESDAGKSTGQFSDHSLAKILMDTTEFDRKDSCSVCDPILALPPPDSCHQSAEEESCSDRGCDNSLAIVPVPTMDAAPPELKPGWPLLHQRISSETQFPDRLSARQISVVQWAMRLPSRNLSYASDQDRKPQDESVPLDSETGAVVPVDYGIVTVSLPEPNSKSIPLELASLHEKYSSSCRLFEYQELVSATSNFLPENLIGKGGSSEVYRGCLPDGQELAVKILKPSDEVLKEFLLEIEIITTLNHKNIISLLGFCFENGNLLLVYDLLSRGSLEENLHGSKKNSLVFGWNERYKVAMGVAEALDYLHCKGDQPVIHRDVKSSNVLLSEDFEPKLSDFGLAKWASTSSSQITCTDVAGTFGYLAPEYFMYGKVHDKIDVYAFGVVLLELLSGRKPISGDFPKGQESLIMWASPLLDSGKVLQLLDPTLGDNYDHEEMERMVLAATLCLRRAPRARPKMSLISKLLHGDADVIKWARSEINVKKAPEMLEDEACPPSNLQSHLNLALLDVEDDLLSMCSVEQHVSLEDYLRGRWSRSSSFD* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0687 736 PANTHER - 4 719 - -
Amo08g0687 736 Pfam Universal stress protein family 14 146 IPR006016 -
Amo08g0687 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Amo08g0687 736 Gene3D Transferase(Phosphotransferase) domain 1 465 678 - -
Amo08g0687 736 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 150 - -
Amo08g0687 736 ProSitePatterns Protein kinases ATP-binding region signature. 396 418 IPR017441 GO:0005524
Amo08g0687 736 Gene3D Phosphorylase Kinase; domain 1 357 464 - -
Amo08g0687 736 SUPERFAMILY Protein kinase-like (PK-like) 371 659 IPR011009 -
Amo08g0687 736 ProSiteProfiles Protein kinase domain profile. 390 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0687 736 CDD USP_Like 15 149 - -
Amo08g0687 736 PANTHER OS08G0249100 PROTEIN 4 719 - -
Amo08g0687 736 Pfam Protein kinase domain 394 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0687 736 SMART serkin_6 390 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g0687 736 Gene3D HUPs 13 151 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0687 Amo-Chr8 12153418 12157891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0687 377 660 Trihelix Transcription Factor Family AT1G68690 45.329 1.24e-73 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo08g0687 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0687 - - aprc:113846853 1048.11